(Q46927194)

26 December 2017

title

Adaptation of Bacillus subtilis carbon core metabolism to simultaneous nutrient limitation and osmotic challenge: a multi-omics perspective (English)

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26 December 2017

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8

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26 December 2017

Michael Lalk

11

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26 December 2017

Sandra Maaß

Sandra Maaß

4

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Jörg Stülke

Jörg Stülke

13

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Christoph Wittmann

Christoph Wittmann

16

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Uwe Völker

Uwe Völker

15

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Michael Hecker

9

Michael Hecker

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26 December 2017

author name string

Michael Kohlstedt

1

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26 December 2017

Praveen K Sappa

2

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26 December 2017

Hanna Meyer

3

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26 December 2017

Adrienne Zaprasis

5

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26 December 2017

Tamara Hoffmann

6

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26 December 2017

Judith Becker

7

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26 December 2017

Jan Maarten van Dijl

10

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26 December 2017

Ulrike Mäder

12

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26 December 2017

Erhard Bremer

14

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26 December 2017

publication date

31 March 2014

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26 December 2017

Environmental Microbiology

published in

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26 December 2017

volume

16

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26 December 2017

issue

6

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26 December 2017

page(s)

1898-1917

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26 December 2017

Complex formation between malate dehydrogenase and isocitrate dehydrogenase from Bacillus subtilis is regulated by tricarboxylic acid cycle metabolites

cites work

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Metabolic engineering of the tricarboxylic acid cycle for improved lysine production by Corynebacterium glutamicum

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Bacillus subtilis during feast and famine: visualization of the overall regulation of protein synthesis during glucose starvation by proteome analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Multiplexed absolute quantification in proteomics using artificial QCAT proteins of concatenated signature peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Osmoregulation in Bacillus subtilis: synthesis of the osmoprotectant glycine betaine from exogenously provided choline

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Osmotically controlled synthesis of the compatible solute proline is critical for cellular defense of Bacillus subtilis against high osmolarity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Global network reorganization during dynamic adaptations of Bacillus subtilis metabolism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Roles of cytoplasmic osmolytes, water, and crowding in the response of Escherichia coli to osmotic stress: biophysical basis of osmoprotection by glycine betaine

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Origins of the osmoprotective properties of betaine and proline in Escherichia coli K-12

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Transcriptional regulation is insufficient to explain substrate-induced flux changes in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Glutamate metabolism in Bacillus subtilis: gene expression and enzyme activities evolved to avoid futile cycles and to allow rapid responses to perturbations of the system

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Stoichiometric growth model for riboflavin-producing Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Bacillus subtilis: from soil bacterium to super-secreting cell factory

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Ecology and genomics of Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

The global repressor SugR controls expression of genes of glycolysis and of the L-lactate dehydrogenase LdhA in Corynebacterium glutamicum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Two glyceraldehyde-3-phosphate dehydrogenases with opposite physiological roles in a nonphotosynthetic bacterium

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Large-scale in vivo flux analysis shows rigidity and suboptimal performance of Bacillus subtilis metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

21 January 2018

Proline to the rescue

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Bacterial growth rate reflects a bottleneck in resource allocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Reconstruction and analysis of the genetic and metabolic regulatory networks of the central metabolism of Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Control of glutamate homeostasis in Bacillus subtilis: a complex interplay between ammonium assimilation, glutamate biosynthesis and degradation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

A comprehensive proteomics and transcriptomics analysis of Bacillus subtilis salt stress adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Bacillus subtilis and its relatives: molecular biological and industrial workhorses

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

SigB-dependent general stress response in Bacillus subtilis and related gram-positive bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Synthesis, release, and recapture of compatible solute proline by osmotically stressed Bacillus subtilis cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Osmotic control of opuA expression in Bacillus subtilis and its modulation in response to intracellular glycine betaine and proline pools

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

KtrAB and KtrCD: two K+ uptake systems in Bacillus subtilis and their role in adaptation to hypertonicity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Salt stress adaptation of Bacillus subtilis: a physiological proteomics approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

VANTED: a system for advanced data analysis and visualization in the context of biological networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Uptake and synthesis of compatible solutes as microbial stress responses to high-osmolality environments

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Genome-wide mRNA profiling in glucose starved Bacillus subtilis cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Metabolic fluxes and beyond-systems biology understanding and engineering of microbial metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

In vivo quantification of intracellular amino acids and intermediates of the methionine pathway in Corynebacterium glutamicum

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Physiological response of Corynebacterium glutamicum to oxidative stress induced by deletion of the transcriptional repressor McbR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

integrOmics: an R package to unravel relationships between two omics datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

YtsJ has the major physiological role of the four paralogous malic enzyme isoforms in Bacillus subtilis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Depletion of thiol-containing proteins in response to quinones in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

A metabolomic view of Staphylococcus aureus and its ser/thr kinase and phosphatase deletion mutants: involvement in cell wall biosynthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Variations of the envelope composition of Bacillus subtilis during growth in hyperosmotic medium

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Role of anionic phospholipids in the adaptation of Bacillus subtilis to high salinity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Generation of multiple cell types in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

SubtiWiki--a comprehensive community resource for the model organism Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

A protocol for the investigation of the intracellular Staphylococcus aureus metabolome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Physical interactions between tricarboxylic acid cycle enzymes in Bacillus subtilis: evidence for a metabolon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Proline utilization by Bacillus subtilis: uptake and catabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Defining the structure of the general stress regulon of Bacillus subtilis using targeted microarray analysis and random forest classification

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Genetic control of osmoadaptive glycine betaine synthesis in Bacillus subtilis through the choline-sensing and glycine betaine-responsive GbsR repressor

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Roles of pyruvate kinase and malic enzyme in Corynebacterium glutamicum for growth on carbon sources requiring gluconeogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Visualizing post genomics data-sets on customized pathway maps by ProMeTra-aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Selected reaction monitoring-based proteomics: workflows, potential, pitfalls and future directions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

OpenFLUX: efficient modelling software for 13C-based metabolic flux analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

FluxMap: a VANTED add-on for the visual exploration of flux distributions in biological networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

13C-flux analysis reveals NADPH-balancing transhydrogenation cycles in stationary phase of nitrogen-starving Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Developments in the use of Bacillus species for industrial production

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Transcriptional and metabolic responses of Bacillus subtilis to the availability of organic acids: transcription regulation is important but not sufficient to account for metabolic adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Carbon catabolite repression in Bacillus subtilis: quantitative analysis of repression exerted by different carbon sources

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Osmoregulation of the opuE proline transport gene from Bacillus subtilis: contributions of the sigma A- and sigma B-dependent stress-responsive promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Genome-wide transcriptional profiling analysis of adaptation of Bacillus subtilis to high salinity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

A molecular mechanism for osmolyte-induced protein stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Maintenance metabolism and carbon fluxes in Bacillus species

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Correcting mass isotopomer distributions for naturally occurring isotopes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Bacterial osmoregulation: a paradigm for the study of cellular homeostasis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Rate of environmental change determines stress response specificity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Osmoprotection of Bacillus subtilis through import and proteolysis of proline-containing peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

A metabolomics and proteomics study of the adaptation of Staphylococcus aureus to glucose starvation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Characterization of the global impact of low temperature gas plasma on vegetative microorganisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

Multiplexed absolute quantification for proteomics using concatenated signature peptides encoded by QconCAT genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12438

21 January 2018

Identifiers

DOI

10.1111/1462-2920.12438

1 reference

26 December 2017

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26 December 2017