(Q22122079)

6 February 2023

29

Peng Guo

Peng

Guo

1 reference

6 February 2023

54

Paul Flicek

Paul

Flicek

1 reference

6 February 2023

41

C Titus Brown

C Titus

Brown

1 reference

6 February 2023

8

Tereza Manousaki

Tereza

Manousaki

1 reference

6 February 2023

34

Magali Ruffier

Magali

Ruffier

1 reference

6 February 2023

3

Carson Holt

Carson

Holt

1 reference

6 February 2023

43

Kaben G Nanlohy

Kaben G

Nanlohy

1 reference

6 February 2023

16

Malcolm Cook

Malcolm

Cook

1 reference

6 February 2023

1

Jeramiah J Smith

Jeramiah J

Smith

1 reference

6 February 2023

24

Katherine M Buckley

Katherine M

Buckley

1 reference

6 February 2023

Yu-Wen Chung-Davidson

42

object named as

Yu-Wen Chung-Davidson

Yu-Wen

Chung-Davidson

1 reference

6 February 2023

37

Matthieu Muffato

Matthieu

Muffato

1 reference

6 February 2023

35

Bronwen L Aken

Bronwen L

Aken

1 reference

6 February 2023

39

Javier Herrero

Javier

Herrero

1 reference

6 February 2023

33

Greg Elgar

Greg

Elgar

1 reference

6 February 2023

12

Joseph D Buxbaum

Joseph D

Buxbaum

1 reference

6 February 2023

49

Bernd Fritzsch

Bernd

Fritzsch

1 reference

6 February 2023

Tatjana Sauka-Spengler

object named as

Tatjana Sauka-Spengler

4

Tatjana

Sauka-Spengler

1 reference

6 February 2023

Leanne M Wiedemann

18

Leanne M

Wiedemann

1 reference

6 February 2023

Shigehiro Kuraku

2

Shigehiro

Kuraku

1 reference

6 February 2023

Marianne E Bronner

55

Marianne E

Bronner

1 reference

6 February 2023

Ona E Bloom

10

Ona E

Bloom

1 reference

6 February 2023

Nicolas Rohner

30

Nicolas

Rohner

1 reference

6 February 2023

51

Baoli Zhu

Baoli

Zhu

1 reference

6 February 2023

31

Clifford J Tabin

Clifford J

Tabin

1 reference

6 February 2023

56

Wesley C Warren

Wesley C

Warren

1 reference

6 February 2023

22

Chris T Amemiya

Chris T

Amemiya

1 reference

6 February 2023

58

Richard K Wilson

Richard K

Wilson

1 reference

6 February 2023

38

Miguel Pignatelli

Miguel

Pignatelli

1 reference

6 February 2023

7

Mark D Yandell

Mark D

Yandell

1 reference

6 February 2023

Sabyasachi Das

26

Sabyasachi

Das

1 reference

6 February 2023

Robb Krumlauf

17

Robb

Krumlauf

1 reference

6 February 2023

52

Lucinda L Fulton

Lucinda L

Fulton

1 reference

6 February 2023

36

Stephen M J

Searle

Stephen M J Searle

1 reference

6 February 2023

57

Sandra W

Clifton

Sandra W Clifton

1 reference

6 February 2023

25

Jonathan P

Rast

Jonathan P Rast

1 reference

6 February 2023

Ning Jiang

5

Ning

Jiang

1 reference

6 February 2023

Michael S Campbell

6

Michael S

Campbell

1 reference

6 February 2023

Jennifer R Morgan

11

Jennifer R

Morgan

1 reference

6 February 2023

Ravi Sachidanandam

13

Ravi

Sachidanandam

1 reference

6 February 2023

Carrie Sims

14

Carrie

Sims

1 reference

6 February 2023

Alexander S Garruss

15

Alexander S

Garruss

1 reference

6 February 2023

Stacia A Sower

19

Stacia A

Sower

1 reference

6 February 2023

Wayne A Decatur

20

Wayne A

Decatur

1 reference

6 February 2023

Jeffrey A Hall

21

Jeffrey A

Hall

1 reference

6 February 2023

Nil R Saha

23

Nil R

Saha

1 reference

6 February 2023

Masayuki Hirano

27

Masayuki

Hirano

1 reference

6 February 2023

Nathanael McCurley

28

Nathanael

McCurley

1 reference

6 February 2023

Paul Piccinelli

32

Paul

Piccinelli

1 reference

6 February 2023

Matthew Jones

40

Matthew

Jones

1 reference

6 February 2023

Scot V Libants

44

Scot V

Libants

1 reference

6 February 2023

Chu-Yin Yeh

45

Chu-Yin

Yeh

1 reference

6 February 2023

David W McCauley

46

David W

McCauley

1 reference

6 February 2023

James A Langeland

47

James A

Langeland

1 reference

6 February 2023

Zeev Pancer

48

Zeev

Pancer

1 reference

6 February 2023

Pieter J de Jong

50

Pieter J

de Jong

1 reference

6 February 2023

Brenda Theising

53

Brenda

Theising

1 reference

6 February 2023

Weiming Li

59

Weiming

Li

1 reference

Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported

6 February 2023

language of work or name

English

0 references

publication date

April 2013

0 references

published in

Nature Genetics

0 references

volume

45

0 references

page(s)

415-21, 421e1-2

0 references

issue

4

0 references

copyright license

start time

24 February 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Insights into bilaterian evolution from three spiralian genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

19 March 2017

The genome of a songbird

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

The genome of the blood fluke Schistosoma mansoni

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

The Schistosoma japonicum genome reveals features of host-parasite interplay

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

TopHat: discovering splice junctions with RNA-Seq

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Genome analysis of the platypus reveals unique signatures of evolution

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

The diploid genome sequence of an individual human

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

M-Coffee: combining multiple sequence alignment methods with T-Coffee

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Gene finding in novel genomes

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Initial sequencing and comparative analysis of the mouse genome

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Base-calling of automated sequencer traces using phred. II. Error probabilities

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Identification of common molecular subsequences

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Timing of genome duplications relative to the origin of the vertebrates: did cyclostomes diverge before or after?

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Phylogenetic conservation of a limb-specific, cis-acting regulator of Sonic hedgehog ( Shh)

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

A long-range Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

The Universal Protein Resource (UniProt) in 2010

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Dissecting early regulatory relationships in the lamprey neural crest gene network.

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Gene order data from a model amphibian (Ambystoma): new perspectives on vertebrate genome structure and evolution

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Repbase Update, a database of eukaryotic repetitive elements

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

VISTA: computational tools for comparative genomics

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

A greedy algorithm for aligning DNA sequences

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

NCBI Reference Sequences: current status, policy and new initiatives

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

CAFE: a computational tool for the study of gene family evolution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Automated de novo identification of repeat sequence families in sequenced genomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Genetic consequences of programmed genome rearrangement

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Evolutionary crossroads in developmental biology: cyclostomes (lamprey and hagfish).

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Functional analysis of conserved non-coding regions around the short stature hox gene (shox) in whole zebrafish embryos

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Nrg1/ErbB signaling networks in Schwann cell development and myelination

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Evolution of adaptive immune recognition in jawless vertebrates

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Early evolution of conserved regulatory sequences associated with development in vertebrates

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Programmed loss of millions of base pairs from a vertebrate genome

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Dual nature of the adaptive immune system in lampreys

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

CONDOR: a database resource of developmentally associated conserved non-coding elements

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Ancient noncoding elements conserved in the human genome

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

AUGUSTUS: ab initio prediction of alternative transcripts

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

APOBEC4, a new member of the AID/APOBEC family of polynucleotide (deoxy)cytidine deaminases predicted by computational analysis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Whole-genome sequence assembly for mammalian genomes: Arachne 2.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Gene duplication and the uniqueness of vertebrate genomes circa 1970-1999.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

An improved approach for construction of bacterial artificial chromosome libraries.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

DIALIGN: multiple DNA and protein sequence alignment at BiBiServ

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Myelin tetraspan family proteins but no non-tetraspan family proteins are present in the ascidian (Ciona intestinalis) genome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Evolution of myelin sheaths: both lamprey and hagfish lack myelin.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Sonic hedgehog function in chondrichthyan fins and the evolution of appendage patterning.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Evidence that mechanisms of fin development evolved in the midline of early vertebrates.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

Elimination of a long-range cis-regulatory module causes complete loss of limb-specific Shh expression and truncation of the mouse limb.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3709584

29 November 2018

Identifiers

DOI

10.1038/NG.2568

1 reference

214947

0 references

214947

1 reference

1 reference

1 reference