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Human housekeeping genes, revisited
scientific article
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instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PubMed ID
23810203
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23810203%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
title
Human housekeeping genes, revisited
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
23810203
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23810203%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
main subject
RNA sequencing
0 references
housekeeping gene
0 references
author
Eli Eisenberg
series ordinal
1
object named as
Eli Eisenberg
author given names
Eli
author last names
Eisenberg
1 reference
stated in
Europe PubMed Central
PubMed ID
23810203
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23810203%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
Erez Y. Levanon
series ordinal
2
object named as
Erez Y Levanon
author given names
Erez Y
author last names
Levanon
1 reference
stated in
Europe PubMed Central
PubMed ID
23810203
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23810203%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
language of work or name
English
0 references
publication date
27 June 2013
1 reference
stated in
Europe PubMed Central
PubMed ID
23810203
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23810203%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
published in
Trends in Genetics
1 reference
stated in
Europe PubMed Central
PubMed ID
23810203
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23810203%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
volume
29
1 reference
stated in
Europe PubMed Central
PubMed ID
23810203
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23810203%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
issue
10
1 reference
stated in
Europe PubMed Central
PubMed ID
23810203
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23810203%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
page(s)
569-574
1 reference
stated in
Europe PubMed Central
PubMed ID
23810203
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23810203%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
cites work
Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples
1 reference
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reference URL
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Repetitive sequence environment distinguishes housekeeping genes
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Crossref
reference URL
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Housekeeping and tissue-specific genes differ in simple sequence repeats in the 5'-UTR region
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Housekeeping gene variability in normal and cancerous colorectal, pancreatic, esophageal, gastric and hepatic tissues
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7 January 2021
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Comparative analysis of processed pseudogenes in the mouse and human genomes
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7 January 2021
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Compactness of human housekeeping genes: selection for economy or genomic design?
1 reference
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reference URL
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7 January 2021
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Protein domains enriched in mammalian tissue-specific or widely expressed genes
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7 January 2021
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On the nature of human housekeeping genes
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reference URL
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7 January 2021
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Housekeeping genes as internal standards: use and limits
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reference URL
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7 January 2021
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Human housekeeping genes are compact
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
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7 January 2021
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inferred from DOI database lookup
Analysis of human transcriptomes.
1 reference
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reference URL
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inferred from DOI database lookup
Extensive transcriptional heterogeneity revealed by isoform profiling
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reference URL
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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
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7 January 2021
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A genomic view of alternative splicing
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Selection for short introns in highly expressed genes
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https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
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Mapping and quantifying mammalian transcriptomes by RNA-Seq
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7 January 2021
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mRNA-Seq whole-transcriptome analysis of a single cell
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Fast gapped-read alignment with Bowtie 2
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7 January 2021
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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
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7 January 2021
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Genome-wide transcription and the implications for genomic organization
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7 January 2021
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RNA-Seq: a revolutionary tool for transcriptomics
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7 January 2021
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A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis
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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
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A universal nonmonotonic relationship between gene compactness and expression levels in multicellular eukaryotes
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7 January 2021
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Substantial biases in ultra-short read data sets from high-throughput DNA sequencing
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7 January 2021
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NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy
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7 January 2021
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Compression of next-generation sequencing reads aided by highly efficient de novo assembly.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
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7 January 2021
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Summaries of Affymetrix GeneChip probe level data
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7 January 2021
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Millions of years of evolution preserved: a comprehensive catalog of the processed pseudogenes in the human genome
1 reference
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reference URL
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7 January 2021
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The human transcriptome map reveals extremes in gene density, intron length, GC content, and repeat pattern for domains of highly and weakly expressed genes
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
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7 January 2021
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Control genes and variability: absence of ubiquitous reference transcripts in diverse mammalian expression studies
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
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7 January 2021
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Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays
1 reference
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7 January 2021
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The Minimal Gene Complement of Mycoplasma genitalium
1 reference
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7 January 2021
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How many genes can make a cell: the minimal-gene-set concept
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7 January 2021
based on heuristic
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GAPDH as a housekeeping gene: analysis of GAPDH mRNA expression in a panel of 72 human tissues
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
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7 January 2021
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A compendium of gene expression in normal human tissues
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
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7 January 2021
based on heuristic
inferred from DOI database lookup
Comparison of human adult and fetal expression and identification of 535 housekeeping/maintenance genes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
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7 January 2021
based on heuristic
inferred from DOI database lookup
Further defining housekeeping, or "maintenance," genes Focus on "A compendium of gene expression in normal human tissues".
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
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7 January 2021
based on heuristic
inferred from DOI database lookup
Comparative analysis of chromatin landscape in regulatory regions of human housekeeping and tissue specific genes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Estimating accuracy of RNA-Seq and microarrays with proteomics
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Definition, conservation and epigenetics of housekeeping and tissue-enriched genes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
How many human genes can be defined as housekeeping with current expression data?
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
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Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Housekeeping genes tend to show reduced upstream sequence conservation.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A scaling normalization method for differential expression analysis of RNA-seq data
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Modeling non-uniformity in short-read rates in RNA-Seq data
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Improving RNA-Seq expression estimates by correcting for fragment bias
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Evidence based selection of housekeeping genes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Detection and removal of biases in the analysis of next-generation sequencing reads
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identification of human housekeeping genes and tissue-selective genes by microarray meta-analysis
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
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7 January 2021
based on heuristic
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Identification of human HK genes and gene expression regulation study in cancer from transcriptomics data analysis
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Validation of housekeeping genes for normalizing RNA expression in real-time PCR.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identification of novel universal housekeeping genes by statistical analysis of microarray data
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.TIG.2013.05.010
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7 January 2021
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Identifiers
DOI
10.1016/J.TIG.2013.05.010
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1005758
stated in
Europe PubMed Central
PubMed ID
23810203
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23810203%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
OpenCitations bibliographic resource ID
1005758
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1005758
PubMed ID
23810203
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1005758
stated in
Europe PubMed Central
PubMed ID
23810203
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23810203%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
ResearchGate publication ID
243966381
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