(Q24206632)

2

Wipapat

Kladwang

1 reference

19 October 2023

Minjae Lee

3

Minjae

Lee

1 reference

19 October 2023

Daniel Cantu

4

Daniel

Cantu

1 reference

19 October 2023

Martin Azizyan

5

Martin

Azizyan

1 reference

19 October 2023

Hanjoo Kim

6

Hanjoo

Kim

1 reference

19 October 2023

Alex Limpaecher

7

Alex

Limpaecher

1 reference

19 October 2023

Adrien Treuille

9

Adrien

Proceedings of the National Academy of Sciences of the United States of America

Treuille

1 reference

19 October 2023

language of work or name

English

0 references

publication date

11 February 2014

0 references

published in

0 references

volume

111

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page(s)

2122-7

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issue

6

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describes a project that uses

crowdsourcing

0 references

cites work

Increased Diels-Alderase activity through backbone remodeling guided by Foldit players

1 reference

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Multiplexed RNA structure characterization with selective 2'-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Higher-order cellular information processing with synthetic RNA devices

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Paradigms for computational nucleic acid design

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Organization of intracellular reactions with rationally designed RNA assemblies

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

The equilibrium partition function and base pair binding probabilities for RNA secondary structure

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

RNA structure analysis at single nucleotide resolution by selective 2'-hydroxyl acylation and primer extension (SHAPE)

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

The mutate-and-map protocol for inferring base pairs in structured RNA.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Cellular-resolution connectomics: challenges of dense neural circuit reconstruction

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Quantitative dimethyl sulfate mapping for automated RNA secondary structure inference

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Squaring theory with practice in RNA design

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

A two-dimensional mutate-and-map strategy for non-coding RNA structure

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Algorithm discovery by protein folding game players

27 September 2017

1 reference

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Understanding the errors of SHAPE-directed RNA structure modeling

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Discovery of selective bioactive small molecules by targeting an RNA dynamic ensemble

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Nanoparticle-mediated delivery of siRNA targeting Parp1 extends survival of mice bearing tumors derived from Brca1-deficient ovarian cancer cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Evaluation of the information content of RNA structure mapping data for secondary structure prediction

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Atomic accuracy in predicting and designing noncanonical RNA structure

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Tertiary motifs revealed in analyses of higher-order RNA junctions

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Structural inference of native and partially folded RNA by high-throughput contact mapping

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

The architectonics of programmable RNA and DNA nanostructures

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

RNA challenges for computational chemists

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

RNA regulation: a new genetics?

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Cooperative binding of effectors by an allosteric ribozyme

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Is a closing "GA pair" a rule for stable loop-loop RNA complexes?

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Nucleic acid junctions and lattices

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Structural analysis by energy dot plot of a large mRNA.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

Reprogramming bacteria to seek and destroy an herbicide

30 May 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1313039111

RNA secondary structure analysis using the Vienna RNA package.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1313039111

NUPACK: Analysis and design of nucleic acid systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1313039111

Galaxy Zoo: the large-scale spin statistics of spiral galaxies in the Sloan Digital Sky Survey★

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1313039111

21 January 2018

Least angle regression

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1313039111

DNA barcoding a useful tool for taxonomists

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1313039111

A Simplex Method for Function Minimization

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1313039111

HiTRACE: high-throughput robust analysis for capillary electrophoresis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1313039111

Massively parallel RNA chemical mapping with a reduced bias MAP-seq protocol.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1313039111

An improved algorithm for nucleic acid secondary structure display

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3926058

29 November 2018

Identifiers

DOI

10.1073/PNAS.1313039111

1 reference

release_nzgrzxdyonc4lha5aup7wyk2wu

0 references

0 references

123965

1 reference

1 reference

1 reference