(Q24288762)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

title

Conservation and variability of dengue virus proteins: implications for vaccine design (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

0 references

0 references

0 references

human leukocyte antigen

0 references

0 references

1 reference

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

Mohammad Asif Khan

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

9

Vladimir Brusic

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

author name string

Eduardo J M Nascimento

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

K N Srinivasan

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

A T Heiny

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

Guang Lan Zhang

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

E T Marques

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

Tin Wee Tan

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

Jerome Salmon

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

J Thomas August

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

language of work or name

English

0 references

publication date

13 August 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

PLoS Neglected Tropical Diseases

12 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

volume

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

page(s)

e272

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

issue

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 2.5 Generic

12 January 2020

copyright license

0 references

on focus list of Wikimedia project

ScienceSource

0 references

cites work

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19 March 2017

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19 March 2017

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19 March 2017

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19 March 2017

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Phylogeny of the genus Flavivirus

19 March 2017

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

19 March 2017

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19 March 2017

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A systematic bioinformatics approach for selection of epitope-based vaccine targets

19 March 2017

1 reference

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Crystal Structure of the Dengue Virus RNA-Dependent RNA Polymerase Catalytic Domain at 1.85-Angstrom Resolution

19 March 2017

1 reference

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Large-scale analysis of antigenic diversity of T-cell epitopes in dengue virus

19 March 2017

1 reference

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Structure of the Dengue Virus Helicase/Nucleoside Triphosphatase Catalytic Domain at a Resolution of 2.4 A

19 March 2017

1 reference

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Early T-cell responses to dengue virus epitopes in Vietnamese adults with secondary dengue virus infections

19 March 2017

1 reference

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Structure of the dengue virus envelope protein after membrane fusion

19 March 2017

1 reference

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An RNA cap (nucleoside-2'-O-)-methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization

19 March 2017

1 reference

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Mutational Evidence for an Internal Fusion Peptide in Flavivirus Envelope Protein E

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Identification of two epitopes on the dengue 4 virus capsid protein recognized by a serotype-specific and a panel of serotype-cross-reactive human CD4+ cytotoxic T-lymphocyte clones

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Definition of an HLA-DPw2-restricted epitope on NS3, recognized by a dengue virus serotype-cross-reactive human CD4+ CD8- cytotoxic T-cell clone

19 March 2017

1 reference

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Emerging flaviviruses: the spread and resurgence of Japanese encephalitis, West Nile and dengue viruses

19 March 2017

1 reference

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Microevolution and virulence of dengue viruses

19 March 2017

1 reference

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Prospects for a dengue virus vaccine

19 March 2017

1 reference

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BLAST: at the core of a powerful and diverse set of sequence analysis tools

7 April 2017

1 reference

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Original antigenic sin and apoptosis in the pathogenesis of dengue hemorrhagic fever

7 April 2017

1 reference

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Preservation of a critical epitope core region is associated with the high degree of flaviviral cross-reactivity exhibited by a dengue-specific CD4+ T cell clone

7 April 2017

1 reference

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Identification of human-to-human transmissibility factors in PB2 proteins of influenza A by large-scale mutual information analysis.

27 September 2017

1 reference

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Evolutionarily conserved protein sequences of influenza a viruses, avian and human, as vaccine targets

27 September 2017

1 reference

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The evolutionary biology of dengue virus

27 September 2017

1 reference

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The envelope glycoprotein domain III of dengue virus serotypes 1 and 2 inhibit virus entry

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

T cell responses in dengue hemorrhagic fever: are cross-reactive T cells suboptimal?

27 September 2017

1 reference

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Translating innate immunity into immunological memory: implications for vaccine development

27 September 2017

1 reference

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SARS coronavirus nucleocapsid immunodominant T-cell epitope cluster is common to both exogenous recombinant and endogenous DNA-encoded immunogens

27 September 2017

1 reference

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Altered cytokine responses of dengue-specific CD4+ T cells to heterologous serotypes

27 September 2017

1 reference

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Induction of protective antibodies against dengue virus by tetravalent DNA immunization of mice with domain III of the envelope protein

27 September 2017

1 reference

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On immunity against infections and vaccines: credo 2004.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Sequences of flavivirus-related RNA viruses persist in DNA form integrated in the genome of Aedes spp. mosquitoes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Degenerate recognition and response of human CD4+ Th cell clones: implications for basic and applied immunology

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Development of a DNA Vaccine Designed to Induce Cytotoxic T Lymphocyte Responses to Multiple Conserved Epitopes in HIV-1

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Optimized determination of T cell epitope responses

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Memory T cells and vaccines

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Scoring residue conservation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Human immunodeficiency virus type 1 subtype C molecular phylogeny: consensus sequence for an AIDS vaccine design?

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Strong HLA class I--restricted T cell responses in dengue hemorrhagic fever: a double-edged sword?

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Epitope clusters in the major outer membrane protein of Chlamydia trachomatis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Localization of CD4+ T cell epitope hotspots to exposed strands of HIV envelope glycoprotein suggests structural influences on antigen processing

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

The causes and consequences of genetic variation in dengue virus

27 September 2017

1 reference

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Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Mice lacking all conventional MHC class II genes

27 September 2017

1 reference

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Dengue virus NS3 serine protease. Crystal structure and insights into interaction of the active site with substrates by molecular modeling and structural analysis of mutational effects

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Altered peptide ligand-induced partial T cell activation: molecular mechanisms and role in T cell biology

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

HLA-DR4-IE chimeric class II transgenic, murine class II-deficient mice are susceptible to experimental allergic encephalomyelitis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Tickling the TCR: selective T-cell functions stimulated by altered peptide ligands

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Expression of HLA-DR4 and human CD4 transgenes in mice determines the variable region beta-chain T-cell repertoire and mediates an HLA-DR-restricted immune response

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

MHC ligands and peptide motifs: first listing

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Dengue virus-specific, HLA-B35-restricted, human CD8+ cytotoxic T lymphocyte (CTL) clones. Recognition of NS3 amino acids 500 to 508 by CTL clones of two different serotype specificities.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Complete nucleotide sequence of dengue type 3 virus genome RNA.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Construction of peptides encompassing multideterminant clusters of human immunodeficiency virus envelope to induce in vitro T cell responses in mice and humans of multiple MHC types

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Variant TCR ligands: new insights into the molecular basis of antigen-dependent signal transduction and T-cell activation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Three regions of HIV-1 gp160 contain clusters of immunodominant CTL epitopes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Phylogeny of the genus flavivirus using complete coding sequences of arthropod-borne viruses and viruses with no known vector

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

T cell responses to a human cartilage autoantigen in the context of rheumatoid arthritis-associated and nonassociated HLA-DR4 alleles

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Immune avoidance strategies in RNA viruses: fitness continuums arising from trade-offs between immunogenicity and antigenic variability.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

An integrative approach to CTL epitope prediction: a combined algorithm integrating MHC class I binding, TAP transport efficiency, and proteasomal cleavage predictions.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Automated generation and evaluation of specific MHC binding predictive tools: ARB matrix applications.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Discovery of promiscuous HLA-II-restricted T cell epitopes with TEPITOPE.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Dengue immune response: low affinity, high febrility

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Recombinant TCR ligand induces tolerance to myelin oligodendrocyte glycoprotein 35-55 peptide and reverses clinical and histological signs of chronic experimental autoimmune encephalomyelitis in HLA-DR2 transgenic mice.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Class I molecules with similar peptide-binding specificities are the result of both common ancestry and convergent evolution.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

The development of multi-epitope vaccines: epitope identification, vaccine design and clinical evaluation.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Generation of tissue-specific and promiscuous HLA ligand databases using DNA microarrays and virtual HLA class II matrices

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Definition of the region on NS3 which contains multiple epitopes recognized by dengue virus serotype-cross-reactive and flavivirus-cross-reactive, HLA-DPw2-restricted CD4+ T cell clones

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2491585

Altered peptide ligand-mediated TCR antagonism can be modulated by a change in a single amino acid residue within the CDR3 beta of an MHC class I-restricted TCR

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18698358

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Clustering of Th Cell Epitopes on Exposed Regions of HIV Envelope Despite Defects in Antibody Activity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18698358

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Negative and positive selection by HLA-DR3(DRw17) molecules in transgenic mice

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18698358

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PNTD.0000272

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18698358%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

2 references