(Q24595809)

7 November 2023

Ilya E Vorontsov

5

Ilya E

Vorontsov

1 reference

7 November 2023

Yulia A Medvedeva

2

Yulia A

Medvedeva

1 reference

7 November 2023

Vsevolod J Makeev

7

Vsevolod J

Makeev

1 reference

7 November 2023

Vladimir B Bajic

6

Vladimir B

Bajic

1 reference

7 November 2023

3

Ulf Schaefer

Ulf

Schaefer

1 reference

7 November 2023

Artem S Kasianov

4

Artem S

Kasianov

1 reference

23175603

Creative Commons Attribution-NonCommercial 3.0 Unported

7 November 2023

language of work or name

English

0 references

publication date

January 2013

0 references

published in

Nucleic Acids Research

0 references

volume

41

0 references

issue

Database issue

0 references

page(s)

D195-202

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copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

A user's guide to the encyclopedia of DNA elements (ENCODE)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

TcoF-DB: dragon database for human transcription co-factors and transcription factor interacting proteins

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Insights from genomic profiling of transcription factors

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

24 March 2017

Consensus sequence Zen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

24 March 2017

Protein-DNA recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

DNA binding sites: representation and discovery

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Reorganizing the protein space at the Universal Protein Resource (UniProt)

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

CORECLUST: identification of the conserved CRM grammar together with prediction of gene regulation.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

A highly efficient and effective motif discovery method for ChIP-seq/ChIP-chip data using positional information

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

The UCSC Genome Browser database: extensions and updates 2011.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Tree-based position weight matrix approach to model transcription factor binding site profiles

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Experimental strategies for studying transcription factor-DNA binding specificities

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Deep and wide digging for binding motifs in ChIP-Seq data.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Multiplexed massively parallel SELEX for characterization of human transcription factor binding specificities

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Homotypic clusters of transcription factor binding sites are a key component of human promoters and enhancers

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Motif discovery and motif finding from genome-mapped DNase footprint data

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Discovering sequence motifs

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

HeliCis: a DNA motif discovery tool for colocalized motif pairs with periodic spacing

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Locating mammalian transcription factor binding sites: a survey of computational and experimental techniques

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Dragon Plant Biology Explorer. A text-mining tool for integrating associations between genetic and biochemical entities with genome annotation and biochemical terms lists

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Dragon TF Association Miner: a system for exploring transcription factor associations through text-mining

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Homotypic regulatory clusters in Drosophila.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

Information analysis of sequences that bind the replication initiator RepA.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

CompleteMOTIFs: DNA motif discovery platform for transcription factor binding experiments

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

is-rSNP: a novel technique for in silico regulatory SNP detection

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531053

A deeper look into transcription regulatory code by preferred pair distance templates for transcription factor binding sites

30 May 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1089

Efficient and accurate P-value computation for Position Weight Matrices

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1089

21 January 2018

Identifiers

DOI

10.1093/NAR/GKS1089

1 reference

journals/nar/KulakovskiyMSKVBM13

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

release_eawcgj6w6nhlrhlfjydkvyl32i

28 January 2021

Fatcat ID

0 references

1 reference

1 reference

23175603

1 reference