(Q24652667)

Christopher C Witt

17

0 references

Rebecca Kimball

Rebecca T Kimball

9

0 references

Edward L. Braun

Edward L Braun

2

0 references

David W. Steadman

15

David W Steadman

0 references

Sushma Reddy

Sushma Reddy

13

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author name string

John Harshman

1

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Michael J Braun

3

0 references

Christopher J Huddleston

4

0 references

Jena L Chojnowski

6

0 references

Shannon J Hackett

7

0 references

Kin-Lan Han

8

0 references

Ben D Marks

10

0 references

Kathleen J Miglia

11

0 references

William S Moore

12

0 references

Frederick H Sheldon

14

0 references

Scott J Steppan

16

0 references

Tamaki Yuri

Proceedings of the National Academy of Sciences of the United States of America

18

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language of work or name

English

0 references

publication date

9 September 2008

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published in

0 references

volume

105

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issue

36

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page(s)

13462-7

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cites work

Higher-order phylogeny of modern birds (Theropoda, Aves: Neornithes) based on comparative anatomy. II. Analysis and discussion

1 reference

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Complete mitochondrial DNA genome sequences of extinct birds: ratite phylogenetics and the vicariance biogeography hypothesis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

MrBayes 3: Bayesian phylogenetic inference under mixed models

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

MODELTEST: testing the model of DNA substitution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

A phylogenomic study of birds reveals their evolutionary history

7 April 2017

1 reference

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Phylogenomics: the beginning of incongruence?

7 April 2017

1 reference

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Phylogenomics and the reconstruction of the tree of life

7 April 2017

1 reference

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Genome-scale phylogeny and the detection of systematic biases

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Likelihood-based tests of topologies in phylogenetics

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Data set incongruence and correlated character evolution: an example of functional convergence in the hind-limbs of stifftail diving ducks

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Complete mitochondrial genome sequences of two extinct moas clarify ratite evolution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Complete mitochondrial DNA genome sequences show that modern birds are not descended from transitional shorebirds

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Avian evolution, Gondwana biogeography and the Cretaceous-Tertiary mass extinction event

7 April 2017

1 reference

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Analyses of mitochondrial DNA nest ratite birds within the Neognathae: supporting a neotenous origin of ratite morphological characters

7 April 2017

1 reference

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Gaps as characters in sequence-based phylogenetic analyses

22 April 2017

1 reference

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Rare genomic changes as a tool for phylogenetics

7 April 2017

1 reference

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Duplication of accelerated evolution and growth hormone gene in passerine birds

7 April 2017

1 reference

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Inconsistency of phylogenetic estimates from concatenated data under coalescence

28 September 2017

1 reference

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Resolving the root of the avian mitogenomic tree by breaking up long branches

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Discordance of species trees with their most likely gene trees.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Parallel radiations in the primary clades of birds

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Fishes and birds: Gondwana life rafts reconsidered

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

True and false gharials: a nuclear gene phylogeny of crocodylia

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Partitioned likelihood support and the evaluation of data set conflict

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Interordinal relationships of birds and other reptiles based on whole mitochondrial genomes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Rooting a phylogeny with homologous genes on opposite sex chromosomes (gametologs): a case study using avian CHD.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Basal divergences in birds and the phylogenetic utility of the nuclear RAG-1 gene

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

The root of the mammalian tree inferred from whole mitochondrial genomes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Inferring pattern and process: maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

The order of sequence alignment can bias the selection of tree topology.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

Introns outperform exons in analyses of basal avian phylogeny using clathrin heavy chain genes

30 May 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0803242105

Four new avian mitochondrial genomes help get to basic evolutionary questions in the late cretaceous

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0803242105

Efficient likelihood computations with nonreversible models of evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0803242105

Cases in which Parsimony or Compatibility Methods will be Positively Misleading

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0803242105

Examining Basal Avian Divergences with Mitochondrial Sequences: Model Complexity, Taxon Sampling, and Sequence Length

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0803242105

Taxon sampling and the phylogenetic position of Passeriformes: evidence from 916 avian cytochrome b sequences.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533212

The utility of DNA sequences of an intron from the beta-fibrinogen gene in phylogenetic analysis of woodpeckers (Aves: Picidae)

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18765814

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The evolution of flightlessness: Is history important?

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0803242105

inferred from DOI database lookup

7 January 2021

based on heuristic

Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0803242105