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Host-microbe interactions shaping the gastrointestinal environment
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PubMed
review article
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Europe PubMed Central
title
Host-microbe interactions shaping the gastrointestinal environment
(English)
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PubMed
author
Thaddeus S. Stappenbeck
series ordinal
2
object named as
Thaddeus S. Stappenbeck
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stated in
Crossref
author name string
Gerard E. Kaiko
series ordinal
1
1 reference
stated in
Crossref
language of work or name
English
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stated in
PubMed
publication date
November 2014
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stated in
PubMed
published in
Trends in Immunology
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stated in
PubMed
volume
35
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stated in
PubMed
issue
11
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stated in
PubMed
page(s)
538-48
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PubMed
cites work
Lineage selection and plasticity in the intestinal crypt
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Enterotypes of the human gut microbiome
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Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa
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Paneth cells directly sense gut commensals and maintain homeostasis at the intestinal host-microbial interface
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Resistant starches types 2 and 4 have differential effects on the composition of the fecal microbiota in human subjects
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MyD88-mediated signals induce the bactericidal lectin RegIII gamma and protect mice against intestinal Listeria monocytogenes infection
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Gut inflammation provides a respiratory electron acceptor for Salmonella
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Cooperativity among secretory IgA, the polymeric immunoglobulin receptor, and the gut microbiota promotes host-microbial mutualism
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Bacterial colonization factors control specificity and stability of the gut microbiota
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Bacteroides thetaiotaomicron and Faecalibacterium prausnitzii influence the production of mucus glycans and the development of goblet cells in the colonic epithelium of a gnotobiotic model rodent
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A crypt-specific core microbiota resides in the mouse colon
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Regulated virulence controls the ability of a pathogen to compete with the gut microbiota.
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Lethal inflammasome activation by a multidrug-resistant pathobiont upon antibiotic disruption of the microbiota
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How glycan metabolism shapes the human gut microbiota
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The antibacterial lectin RegIIIgamma promotes the spatial segregation of microbiota and host in the intestine
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Enterobacteriaceae act in concert with the gut microbiota to induce spontaneous and maternally transmitted colitis
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Dominant and diet-responsive groups of bacteria within the human colonic microbiota
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Reversible microbial colonization of germ-free mice reveals the dynamics of IgA immune responses
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Expression of the cathelicidin LL-37 is modulated by short chain fatty acids in colonocytes: relevance of signalling pathways
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 September 2017
Genetic and functional analysis of a PmrA-PmrB-regulated locus necessary for lipopolysaccharide modification, antimicrobial peptide resistance, and oral virulence of Salmonella enterica serovar typhimurium
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 September 2017
Analysis of intestinal flora development in breast-fed and formula-fed infants by using molecular identification and detection methods
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 September 2017
Detoxification of hydrogen sulfide and methanethiol in the cecal mucosa
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 September 2017
Absence of epithelial immunoglobulin A transport, with increased mucosal leakiness, in polymeric immunoglobulin receptor/secretory component-deficient mice
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 September 2017
Antimicrobial defensin peptides form voltage-dependent ion-permeable channels in planar lipid bilayer membranes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 September 2017
Increase in the Population of Duodenal Immunoglobulin A Plasmocytes in Axenic Mice Associated with Different Living or Dead Bacterial Strains of Intestinal Origin
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 September 2017
An ecological network of polysaccharide utilization among human intestinal symbionts
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
31 May 2018
Mice carrying a knock-in mutation of Aicda resulting in a defect in somatic hypermutation have impaired gut homeostasis and compromised mucosal defense
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
31 May 2018
Modulation of Shigella virulence in response to available oxygen in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
31 May 2018
Comparison of carbon nutrition for pathogenic and commensal Escherichia coli strains in the mouse intestine
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
31 May 2018
Induction of protective IgA by intestinal dendritic cells carrying commensal bacteria
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
31 May 2018
Expression and regulation of the human beta-defensins hBD-1 and hBD-2 in intestinal epithelium.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
31 May 2018
Short-chain organic acids at ph 5.0 kill Escherichia coli and Salmonella spp. without causing membrane perturbation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
31 May 2018
Digestion and physiological properties of resistant starch in the human large bowel.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
19 June 2018
Microbiota-derived hydrogen fuels Salmonella typhimurium invasion of the gut ecosystem
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 November 2018
Immunohistochemical search for viral and bacterial antigens in Crohn's disease
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 November 2018
Long-term follow-up of colonoscopic fecal microbiota transplant for recurrent Clostridium difficile infection
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 November 2018
Drosophila intestinal response to bacterial infection: activation of host defense and stem cell proliferation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 November 2018
Secreted enteric antimicrobial activity localises to the mucus surface layer.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 November 2018
Selection of recently isolated colicinogenic Escherichia coli strains inhibitory to Escherichia coli O157:H7.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 November 2018
Influence of intestinal anaerobes and organic acids on the growth of enterohaemorrhagic Escherichia coli O157:H7.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 November 2018
Downregulation of bactericidal peptides in enteric infections: a novel immune escape mechanism with bacterial DNA as a potential regulator
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 November 2018
Histochemical, lectin-histochemical and morphometrical characteristics of intestinal goblet cells of germfree and conventional mice.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4253298
retrieved
28 November 2018
Changes in colonic mucins of germfree rats in response to the introduction of a "normal" rat microbial flora. Rat colonic mucin
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25220948
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The dependence of the in vitro fermentation of dietary fibre to short-chain fatty acids on the contents of soluble non-starch polysaccharides
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25220948
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Reduced Enterobacterial and Increased Staphylococcal Colonization of the Infantile Bowel: An Effect of Hygienic Lifestyle?
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25220948
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Reduction of disulphide bonds unmasks potent antimicrobial activity of human β-defensin 1
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25220948
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The intestinal microflora of infants: composition of fecal flora in breast-fed and bottle-fed infants
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25220948
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.IT.2014.08.002
0 references
PMC publication ID
4253298
1 reference
stated in
PubMed
PubMed publication ID
25220948
1 reference
stated in
PubMed
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