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Systems analysis of high-throughput data
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scholarly article
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PubMed
review article
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stated in
Europe PubMed Central
title
Systems analysis of high-throughput data
(English)
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author
Rosemary Braun
series ordinal
1
object named as
Rosemary Braun
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language of work or name
English
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stated in
PubMed
publication date
2014
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stated in
PubMed
published in
Advances in Experimental Medicine and Biology
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stated in
PubMed
volume
844
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stated in
PubMed
page(s)
153-87
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stated in
PubMed
cites work
Database resources of the National Center for Biotechnology Information
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
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21 March 2017
Potential etiologic and functional implications of genome-wide association loci for human diseases and traits
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21 March 2017
PID: the Pathway Interaction Database
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PubMed Central
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21 March 2017
Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays
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21 March 2017
Genome-wide association studies for complex traits: consensus, uncertainty and challenges
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21 March 2017
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Searching for differentially expressed gene combinations
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21 March 2017
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21 March 2017
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21 March 2017
Cluster analysis and display of genome-wide expression patterns
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7 April 2017
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7 April 2017
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Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation
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28 September 2017
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Pathways of distinction analysis: a new technique for multi-SNP analysis of GWAS data
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28 September 2017
Statistical methods for pathway analysis of genome-wide data for association with complex genetic traits
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28 September 2017
Modeling reveals bistability and low-pass filtering in the network module determining blood stem cell fate
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28 September 2017
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28 September 2017
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28 September 2017
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28 September 2017
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28 September 2017
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28 September 2017
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28 September 2017
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28 September 2017
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28 September 2017
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 September 2017
Linking the genes: inferring quantitative gene networks from microarray data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 September 2017
Reverse engineering of biological complexity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 September 2017
Degeneracy and complexity in biological systems
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 September 2017
Analysis of gene expression data using self-organizing maps
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 September 2017
Spatially uniform relieff (SURF) for computationally-efficient filtering of gene-gene interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
31 May 2018
Identifying functional modules in protein-protein interaction networks: an integrated exact approach
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
31 May 2018
How to infer gene networks from expression profiles
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
31 May 2018
Revealing differences in gene network inference algorithms on the network level by ensemble methods.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 November 2018
Reverse-engineering transcription control networks.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 November 2018
BioNet: an R-Package for the functional analysis of biological networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 November 2018
Gene expression network analysis and applications to immunology.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 November 2018
Extensions to gene set enrichment.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 November 2018
Pathway analysis using random forests classification and regression
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 November 2018
Molecular profiling of diffuse large B-cell lymphoma identifies robust subtypes including one characterized by host inflammatory response
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 November 2018
How many clusters? An information-theoretic perspective.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 November 2018
Reconstructing biological networks using conditional correlation analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 November 2018
Learning eigenfunctions links spectral embedding and kernel PCA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 November 2018
Gene expression profile of adult T-cell acute lymphocytic leukemia identifies distinct subsets of patients with different response to therapy and survival.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4426208
retrieved
28 November 2018
Statistical methods for identifying differentially expressed gene combinations
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25480641
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1007/978-1-4939-2095-2_8
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3606470
OpenCitations bibliographic resource ID
3606470
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3606470
PMC publication ID
4426208
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3606470
PubMed publication ID
25480641
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3606470
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