(Q27024835)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24605849%20AND%20SRC:MED&resulttype=core&format=json

9 March 2020

review article

1 reference

title

Epigenetics, chromatin and genome organization: recent advances from the ENCODE project (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24605849%20AND%20SRC:MED&resulttype=core&format=json

9 March 2020

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24605849%20AND%20SRC:MED&resulttype=core&format=json

9 March 2020

author name string

L Siggens

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24605849%20AND%20SRC:MED&resulttype=core&format=json

9 March 2020

language of work or name

1 reference

27 March 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24605849%20AND%20SRC:MED&resulttype=core&format=json

Journal of Internal Medicine

9 March 2020

published in

2 references

PubMed

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24605849%20AND%20SRC:MED&resulttype=core&format=json

9 March 2020

volume

276

2 references

PubMed

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24605849%20AND%20SRC:MED&resulttype=core&format=json

9 March 2020

issue

3

2 references

PubMed

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24605849%20AND%20SRC:MED&resulttype=core&format=json

9 March 2020

page(s)

201-214

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24605849%20AND%20SRC:MED&resulttype=core&format=json

Targeting epigenetic readers in cancer.

9 March 2020

cites work

1 reference

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21 January 2018

Mapping human epigenomes

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Epigenetic mechanisms of depression and antidepressant action

21 January 2018

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Cancer epigenetics reaches mainstream oncology

21 January 2018

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A chromatin-mediated reversible drug-tolerant state in cancer cell subpopulations

21 January 2018

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Epigenetic protein families: a new frontier for drug discovery

21 January 2018

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Combinatorial patterns of histone acetylations and methylations in the human genome

21 January 2018

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Functions of DNA methylation: islands, start sites, gene bodies and beyond

21 January 2018

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Initial sequencing and analysis of the human genome

21 January 2018

1 reference

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Human DNA methylomes at base resolution show widespread epigenomic differences

21 January 2018

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DNA methylation directs a time-dependent repression of transcription initiation.

21 January 2018

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Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription

21 January 2018

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Cytosine methylation prevents binding to DNA of a HeLa cell transcription factor required for optimal expression of the adenovirus major late promoter

21 January 2018

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Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks

21 January 2018

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Conserved role of intragenic DNA methylation in regulating alternative promoters

21 January 2018

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Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition

21 January 2018

1 reference

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CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing

21 January 2018

1 reference

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Histone chaperones in nucleosome assembly and human disease

21 January 2018

1 reference

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Mechanisms and functions of ATP-dependent chromatin-remodeling enzymes

21 January 2018

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The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly

21 January 2018

1 reference

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H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions

21 January 2018

1 reference

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H2A.Z facilitates access of active and repressive complexes to chromatin in embryonic stem cell self-renewal and differentiation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Histone H2A.Z inheritance during the cell cycle and its impact on promoter organization and dynamics.

21 January 2018

1 reference

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Gene reactivation by 5-aza-2'-deoxycytidine-induced demethylation requires SRCAP-mediated H2A.Z insertion to establish nucleosome depleted regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Signals and combinatorial functions of histone modifications

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Regulation of nucleosome dynamics by histone modifications

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Nucleosome-interacting proteins regulated by DNA and histone methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Histone modifications at human enhancers reflect global cell-type-specific gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

H3K4me3 interactions with TAF3 regulate preinitiation complex assembly and selective gene activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Recognition of trimethylated histone H3 lysine 4 facilitates the recruitment of transcription postinitiation factors and pre-mRNA splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

SETDB1: a novel KAP-1-associated histone H3, lysine 9-specific methyltransferase that contributes to HP1-mediated silencing of euchromatic genes by KRAB zinc-finger proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Proviral silencing in embryonic stem cells requires the histone methyltransferase ESET.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Histone lysine methylation dynamics: establishment, regulation, and biological impact

21 January 2018

1 reference

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A double take on bivalent promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Regulation of transcription through acetylation of H3K122 on the lateral surface of the histone octamer

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Functions of site-specific histone acetylation and deacetylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Activator-dependent transcription from chromatin in vitro involving targeted histone acetylation by p300.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Expression noise and acetylation profiles distinguish HDAC functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Genomewide analysis of nucleosome density histone acetylation and HDAC function in fission yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Deconstructing repression: evolving models of co-repressor action

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Histone modification patterns and epigenetic codes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

The ENCODE (ENCyclopedia Of DNA Elements) Project

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Mapping and analysis of chromatin state dynamics in nine human cell types

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

An integrated encyclopedia of DNA elements in the human genome

21 January 2018

1 reference

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GENCODE: the reference human genome annotation for The ENCODE Project

21 January 2018

1 reference

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Landscape of transcription in human cells

21 January 2018

1 reference

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A pseudogene long-noncoding-RNA network regulates PTEN transcription and translation in human cells

21 January 2018

1 reference

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Expressed pseudogenes in the transcriptional landscape of human cancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

The GENCODE pseudogene resource

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

The transcriptional landscape of the mammalian genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

CAGE: cap analysis of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

A user's guide to the encyclopedia of DNA elements (ENCODE)

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Genome-wide analysis of mammalian promoter architecture and evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

High-throughput transcription profiling identifies putative epigenetic regulators of hematopoiesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Analysis of the DNA methylome and transcriptome in granulopoiesis reveals timed changes and dynamic enhancer methylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

DNase-seq: a high-resolution technique for mapping active gene regulatory elements across the genome from mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Intergenic transcription and developmental remodeling of chromatin subdomains in the human beta-globin locus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

The accessible chromatin landscape of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Transcription factor occupancy can mediate active turnover of DNA methylation at regulatory regions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Nucleosome dynamics define transcriptional enhancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

FOXA1 is a key determinant of estrogen receptor function and endocrine response

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Dynamic exchange at regulatory elements during chromatin remodeling underlies assisted loading mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

CTCF: master weaver of the genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

ChIA-PET tool for comprehensive chromatin interaction analysis with paired-end tag sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

CTCF-mediated functional chromatin interactome in pluripotent cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Widespread plasticity in CTCF occupancy linked to DNA methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Characterization of enhancer function from genome-wide analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

The long-range interaction landscape of gene promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Evidence of abundant purifying selection in humans for recently acquired regulatory functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Integrative annotation of chromatin elements from ENCODE data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Comment on "Evidence of abundant purifying selection in humans for recently acquired regulatory functions".

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Response to comment on "Evidence of abundant purifying selection in humans for recently acquired regulatory functions".

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

On the immortality of television sets: "function" in the human genome according to the evolution-free gospel of ENCODE

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Systematic localization of common disease-associated variation in regulatory DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

The NIH Roadmap Epigenomics Mapping Consortium

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Modification of enhancer chromatin: what, how, and why?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

The landscape of DNA repeat elements in human heart failure

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Distinct epigenomic features in end-stage failing human hearts

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

The common colorectal cancer predisposition SNP rs6983267 at chromosome 8q24 confers potential to enhanced Wnt signaling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

Understanding transcriptional regulation by integrative analysis of transcription factor binding data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJOIM.12231

21 January 2018

Identifiers

DOI

10.1111/JOIM.12231

2 references

Consolidated OpenCitations Corpus – April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24605849%20AND%20SRC:MED&resulttype=core&format=json

9 March 2020

1 reference

Consolidated OpenCitations Corpus – April 2017

2 references

Consolidated OpenCitations Corpus – April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24605849%20AND%20SRC:MED&resulttype=core&format=json