(Q27322649)

26 June 2017

title

A new class of marine Euryarchaeota group II from the Mediterranean deep chlorophyll maximum (English)

1 reference

Purificación López-García

26 June 2017

1 reference

Purificación López-García

6

0 references

Nikole E. Kimes

5

Nikole Kimes

1 reference

Francisco Rodriguez-Valera

26 June 2017

8

Francisco Rodriguez-Valera

1 reference

Ana-Belen Martin-Cuadrado

26 June 2017

1

Ana-Belen Martin-Cuadrado

1 reference

26 June 2017

author name string

Inmaculada Garcia-Heredia

2

1 reference

26 June 2017

Aitor Gonzaga Moltó

3

1 reference

26 June 2017

Rebeca López-Úbeda

4

1 reference

26 June 2017

David Moreira

7

1 reference

26 June 2017

language of work or name

English

0 references

publication date

23 December 2014

1 reference

26 June 2017

1 reference

26 June 2017

volume

9

1 reference

26 June 2017

issue

7

1 reference

26 June 2017

page(s)

1619-1634

1 reference

Genomic and metabolic diversity of Marine Group I Thaumarchaeota in the mesopelagic of two subtropical gyres

26 June 2017

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1 reference

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21 March 2017

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21 March 2017

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Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum

21 March 2017

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21 March 2017

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21 March 2017

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21 March 2017

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21 March 2017

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21 March 2017

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21 March 2017

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21 March 2017

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Environmental genome shotgun sequencing of the Sargasso Sea

21 March 2017

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21 March 2017

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Prodigal: prokaryotic gene recognition and translation initiation site identification

21 March 2017

1 reference

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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

7 April 2017

1 reference

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Community genomics among stratified microbial assemblages in the ocean's interior

7 April 2017

1 reference

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Pangenome evidence for extensive interdomain horizontal transfer affecting lineage core and shell genes in uncultured planktonic thaumarchaeota and euryarchaeota

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

The Amazon continuum dataset: quantitative metagenomic and metatranscriptomic inventories of the Amazon River plume, June 2010

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Contrasting genomic properties of free-living and particle-attached microbial assemblages within a coastal ecosystem

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Genomic diversity of "deep ecotype" Alteromonas macleodii isolates: evidence for Pan-Mediterranean clonal frames

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Breaking the carboxyl rule: lysine 96 facilitates reprotonation of the Schiff base in the photocycle of a retinal protein from Exiguobacterium sibiricum

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Building phylogenetic trees from molecular data with MEGA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Pattern and synchrony of gene expression among sympatric marine microbial populations.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Polyclonality of concurrent natural populations of Alteromonas macleodii

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Diversity and population structure of Marine Group A bacteria in the Northeast subarctic Pacific Ocean

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Diversity, assembly and regulation of archaeal type IV pili-like and non-type-IV pili-like surface structures

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Role for urea in nitrification by polar marine Archaea

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Metagenomic analysis of hadopelagic microbial assemblages thriving at the deepest part of Mediterranean Sea, Matapan-Vavilov Deep

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

The metatranscriptome of a deep-sea hydrothermal plume is dominated by water column methanotrophs and lithotrophs

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Untangling genomes from metagenomes: revealing an uncultured class of marine Euryarchaeota

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Bacterial community transcription patterns during a marine phytoplankton bloom

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Abundance and phylogenetic identity of archaeoplankton in the permanent oxygen minimum zone of the eastern tropical South Pacific.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Microbial metatranscriptomics in a permanent marine oxygen minimum zone.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Ecosystem-specific selection pressures revealed through comparative population genomics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Metagenome of the Mediterranean deep chlorophyll maximum studied by direct and fosmid library 454 pyrosequencing

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsin-producing microbial community in the North Sea.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Widespread known and novel phosphonate utilization pathways in marine bacteria revealed by functional screening and metagenomic analyses

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Comparative metagenomic analysis of a microbial community residing at a depth of 4,000 meters at station ALOHA in the North Pacific subtropical gyre

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Proteorhodopsins: an array of physiological roles?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Hindsight in the relative abundance, metabolic potential and genome dynamics of uncultivated marine archaea from comparative metagenomic analyses of bathypelagic plankton of different oceanic regions

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Design and testing of 'genome-proxy' microarrays to profile marine microbial communities

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Look on the positive side! The orientation, identification and bioenergetics of 'Archaeal' membrane-bound nitrate reductases

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Light stimulates growth of proteorhodopsin-containing marine Flavobacteria.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

A ubiquitous thermoacidophilic archaeon from deep-sea hydrothermal vents.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Archaeal mysteries of the deep revealed

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Phosphoenolpyruvate synthetase and pyruvate, phosphate dikinase of Thermoproteus tenax: key pieces in the puzzle of archaeal carbohydrate metabolism.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Reduced mixing generates oscillations and chaos in the oceanic deep chlorophyll maximum

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Analysis of a genome fragment of a deep-sea uncultivated Group II euryarchaeote containing 16S rDNA, a spectinomycin-like operon and several energy metabolism genes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Cyclic di-GMP as a bacterial second messenger.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Archaeal dominance in the mesopelagic zone of the Pacific Ocean

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Phosphoenolpyruvate synthetase from the hyperthermophilic archaeon Pyrococcus furiosus

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

A few cosmopolitan phylotypes dominate planktonic archaeal assemblages in widely different oceanic provinces

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Visualization and enumeration of marine planktonic archaea and bacteria by using polyribonucleotide probes and fluorescent in situ hybridization

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Bacterioplankton compositions of lakes and oceans: a first comparison based on fluorescence in situ hybridization.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Comparative genomics of the Archaea (Euryarchaeota): evolution of conserved protein families, the stable core, and the variable shell.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

The primary structure of halocyanin, an archaeal blue copper protein, predicts a lipid anchor for membrane fixation.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Picocyanobacteria containing a novel pigment gene cluster dominate the brackish water Baltic Sea

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Patterns of ecological specialization among microbial populations in the Red Sea and diverse oligotrophic marine environments.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Phylogeny of Rieske/cytb complexes with a special focus on the Haloarchaeal enzymes.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

The "green" phylogenetic clade of Rieske/cytb complexes.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Explaining microbial population genomics through phage predation.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Hyperproduction and application of alpha-agarase to enzymatic enhancement of antioxidant activity of porphyran

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4478702

Flotillins functionally organize the bacterial membrane

31 May 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.249

Unique archaeal assemblages in the Arctic Ocean unveiled by massively parallel tag sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.249

Inter-annual recurrence of archaeal assemblages in the coastal NW Mediterranean Sea (Blanes Bay Microbial Observatory)

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.249

Variations in spatial and temporal distribution of Archaea in the North Sea in relation to environmental variables

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.249

Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.249

Identification of ribosomal RNA genes in metagenomic fragments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.249

A light-driven sodium ion pump in marine bacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.249

Single-cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.249

The Rieske protein: a case study on the pitfalls of multiple sequence alignments and phylogenetic reconstruction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.249

Prediction of effective genome size in metagenomic samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.249

Variability of deep chlorophyll maximum characteristics in the Northwestern Mediterranean

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.249

FactoMineR: AnRPackage for Multivariate Analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.249

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2014.249

1 reference

Dimensions Publication ID

26 June 2017

1021352867

0 references

OpenCitations bibliographic resource ID

1773005

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1773005

1 reference