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Effectors of lysine 4 methylation of histone H3 in Saccharomyces cerevisiae are negative regulators of PHO5 and GAL1-10.
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scholarly article
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PubMed
PubMed ID
15180994
retrieved
1 December 2016
title
Effectors of lysine 4 methylation of histone H3 in Saccharomyces cerevisiae are negative regulators of PHO5 and GAL1-10.
(English)
1 reference
stated in
PubMed
PubMed ID
15180994
retrieved
1 December 2016
main subject
cell biology
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Saccharomyces cerevisiae
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Paf1p YBR279W
1 reference
stated in
GOA release 2020-03-11
Rtf1p YGL244W
1 reference
stated in
GOA release 2020-03-11
author name string
Christopher D Carvin
series ordinal
1
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Michael P Kladde
series ordinal
2
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language of work or name
English
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publication date
6 August 2004
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published in
Journal of Biological Chemistry
1 reference
stated in
PubMed
PubMed ID
15180994
retrieved
1 December 2016
volume
279
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issue
32
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page(s)
33057-62
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cites work
Rad6 plays a role in transcriptional activation through ubiquitylation of histone H2B.
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Transcriptional activation via sequential histone H2B ubiquitylation and deubiquitylation, mediated by SAGA-associated Ubp8.
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The Paf1 complex is essential for histone monoubiquitination by the Rad6-Bre1 complex, which signals for histone methylation by COMPASS and Dot1p
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The Rtf1 component of the Paf1 transcriptional elongation complex is required for ubiquitination of histone H2B.
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Saccharomyces cerevisiae Set1p is a methyltransferase specific for lysine 4 of histone H3 and is required for efficient gene expression.
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The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation
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A conserved RING finger protein required for histone H2B monoubiquitination and cell size control.
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The Paf1 complex physically and functionally associates with transcription elongation factors in vivo
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Set2 is a nucleosomal histone H3-selective methyltransferase that mediates transcriptional repression.
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COMPASS, a histone H3 (Lysine 4) methyltransferase required for telomeric silencing of gene expression
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PubMed Central
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COMPASS: a complex of proteins associated with a trithorax-related SET domain protein
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PubMed Central
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Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain
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Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins
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SET1, a yeast member of the trithorax family, functions in transcriptional silencing and diverse cellular processes
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HDA1 and RPD3 are members of distinct yeast histone deacetylase complexes that regulate silencing and transcription
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Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications
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Histone H3 lysine 4 methylation is mediated by Set1 and required for cell growth and rDNA silencing in Saccharomyces cerevisiae
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Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity
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Active genes are tri-methylated at K4 of histone H3
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Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II
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PubMed Central
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Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast
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Methylation of histone H3 Lys 4 in coding regions of active genes
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PubMed Central
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A unified theory of gene expression
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PubMed Central
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Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries
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Deubiquitination of histone H2B by a yeast acetyltransferase complex regulates transcription.
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Transcription elongation: TLKing to chromatin?
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Set2-catalyzed methylation of histone H3 represses basal expression of GAL4 in Saccharomyces cerevisiae
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PubMed Central
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Targeted cytosine methylation for in vivo detection of protein-DNA interactions.
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Tails of intrigue: phosphorylation of RNA polymerase II mediates histone methylation
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29 September 2017
Polyphosphate Loss Promotes SNF/SWI- and Gcn5-Dependent Mitotic Induction of PHO5
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29 September 2017
The E2 ubiquitin conjugase Rad6 is required for the ArgR/Mcm1 repression of ARG1 transcription
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PubMed Central
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29 September 2017
Nucleosomes and the chromatin fiber
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PubMed Central
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29 September 2017
Methylation of histone H3 at lysine 4 is highly conserved and correlates with transcriptionally active nuclei in Tetrahymena
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PubMed Central
reference URL
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29 September 2017
Direct study of DNA-protein interactions in repressed and active chromatin in living cells.
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PubMed Central
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29 September 2017
Signaling phosphate starvation
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PubMed Central
reference URL
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29 September 2017
Paf1p, an RNA polymerase II-associated factor in Saccharomyces cerevisiae, may have both positive and negative roles in transcription
1 reference
stated in
PubMed Central
reference URL
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29 September 2017
Depletion of histone H4 and nucleosomes activates the PHO5 gene in Saccharomyces cerevisiae.
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PubMed Central
reference URL
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29 September 2017
Essential and redundant functions of histone acetylation revealed by mutation of target lysines and loss of the Gcn5p acetyltransferase
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PubMed Central
reference URL
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2 June 2018
Evidence that Set1, a factor required for methylation of histone H3, regulates rDNA silencing in S. cerevisiae by a Sir2-independent mechanism
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1074%2FJBC.M405033200
retrieved
21 January 2018
Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1074%2FJBC.M405033200
retrieved
21 January 2018
Effects of tethering HP1 to euchromatic regions of the Drosophila genome.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1074%2FJBC.M405033200
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21 January 2018
Gene-specific targeting of H3K9 methylation is sufficient for initiating repression in vivo.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1074%2FJBC.M405033200
retrieved
21 January 2018
Proteasomal ATPases link ubiquitylation of histone H2B to methylation of histone H3.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1074%2FJBC.M405033200
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21 January 2018
Yeast carboxyl-terminal domain kinase I positively and negatively regulates RNA polymerase II carboxyl-terminal domain phosphorylation
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15180994
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1074/JBC.M405033200
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
631546
OpenCitations bibliographic resource ID
631546
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
631546
PMCID
3697737
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
631546
PubMed ID
15180994
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
631546
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