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Polyadenylation linked to transcription termination directs the processing of snoRNA precursors in yeast
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instance of
scholarly article
1 reference
stated in
PubMed
PubMed ID
18951092
retrieved
1 December 2016
title
Polyadenylation linked to transcription termination directs the processing of snoRNA precursors in yeast
(English)
1 reference
stated in
PubMed
PubMed ID
18951092
retrieved
1 December 2016
main subject
cell biology
0 references
polyadenylation-dependent snoRNA 3'-end processing
1 reference
stated in
Gene Ontology release 2020-05-02
Gene Ontology ID
GO:0071051
ncRNA polyadenylation
1 reference
stated in
Gene Ontology release 2020-05-02
Gene Ontology ID
GO:0043629
sno(s)RNA polyadenylation
1 reference
stated in
Gene Ontology release 2020-05-02
Gene Ontology ID
GO:0071050
Non-canonical poly(A) polymerase TRF5 YNL299W
1 reference
stated in
GOA release 2020-03-11
Polynucleotide adenylyltransferase PAP1 YKR002W
1 reference
stated in
GOA release 2020-03-11
Exosome nuclease subunit RRP6 YOR001W
1 reference
stated in
GOA release 2020-03-11
Non-canonical poly(A) polymerase PAP2 YOL115W
1 reference
stated in
GOA release 2020-03-11
author
Pawel Grzechnik
series ordinal
1
object named as
Pawel Grzechnik
0 references
Joanna Kufel
series ordinal
2
object named as
Joanna Kufel
0 references
language of work or name
English
0 references
publication date
24 October 2008
0 references
published in
Molecular Cell
1 reference
stated in
PubMed
PubMed ID
18951092
retrieved
1 December 2016
volume
32
0 references
page(s)
247-58
0 references
issue
2
0 references
cites work
The Nrd1–Nab3–Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain
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Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control
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A single subunit, Dis3, is essentially responsible for yeast exosome core activity
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Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3.
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Surveillance of nuclear-restricted pre-ribosomes within a subnucleolar region of Saccharomyces cerevisiae
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20 March 2017
cis- and trans-Acting determinants of transcription termination by yeast RNA polymerase II
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Nuclear RNA surveillance in Saccharomyces cerevisiae: Trf4p-dependent polyadenylation of nascent hypomethylated tRNA and an aberrant form of 5S rRNA.
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Nrd1 interacts with the nuclear exosome for 3' processing of RNA polymerase II transcripts
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PubMed Central
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Yeast Trf5p is a nuclear poly(A) polymerase
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PubMed Central
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Contributions of Trf4p- and Trf5p-dependent polyadenylation to the processing and degradative functions of the yeast nuclear exosome
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20 March 2017
A Requirement for the Saccharomyces cerevisiae Paf1 complex in snoRNA 3' end formation
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20 March 2017
Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase
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RNA degradation by the exosome is promoted by a nuclear polyadenylation complex
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PubMed Central
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A new yeast poly(A) polymerase complex involved in RNA quality control
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20 March 2017
Coupling between snoRNP assembly and 3' processing controls box C/D snoRNA biosynthesis in yeast
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Functions for S. cerevisiae Swd2p in 3' end formation of specific mRNAs and snoRNAs and global histone 3 lysine 4 methylation
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Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae
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20 March 2017
Rrp47p is an exosome-associated protein required for the 3' processing of stable RNAs.
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Ssu72 protein mediates both poly(A)-coupled and poly(A)-independent termination of RNA polymerase II transcription
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PubMed Central
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Organization and function of APT, a subcomplex of the yeast cleavage and polyadenylation factor involved in the formation of mRNA and small nucleolar RNA 3'-ends
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PubMed Central
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20 March 2017
Pti1p and Ref2p found in association with the mRNA 3' end formation complex direct snoRNA maturation
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PubMed Central
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20 March 2017
Ssu72 is a phosphatase essential for transcription termination of snoRNAs and specific mRNAs in yeast
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PubMed Central
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Quality control of mRNA 3'-end processing is linked to the nuclear exosome
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PubMed Central
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20 March 2017
RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcripts
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PubMed Central
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20 March 2017
Synthesis and assembly of the box C+D small nucleolar RNPs
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20 March 2017
Yeast exosome mutants accumulate 3'-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs
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20 March 2017
Functions of the exosome in rRNA, snoRNA and snRNA synthesis
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20 March 2017
NAB2: a yeast nuclear polyadenylated RNA-binding protein essential for cell viability
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PubMed Central
reference URL
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20 March 2017
Characterization of nuclear polyadenylated RNA-binding proteins in Saccharomyces cerevisiae.
1 reference
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PubMed Central
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20 March 2017
Small nucleolar RNAs: an abundant group of noncoding RNAs with diverse cellular functions
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PubMed Central
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20 March 2017
The essential WD repeat protein Swd2 has dual functions in RNA polymerase II transcription termination and lysine 4 methylation of histone H3
1 reference
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PubMed Central
reference URL
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20 March 2017
The mRNA encoding the yeast ARE-binding protein Cth2 is generated by a novel 3' processing pathway
1 reference
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PubMed Central
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29 September 2017
Depletion of the yeast nuclear exosome subunit Rrp6 results in accumulation of polyadenylated RNAs in a discrete domain within the nucleolus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593888
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29 September 2017
Interaction of yeast RNA-binding proteins Nrd1 and Nab3 with RNA polymerase II terminator elements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593888
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29 September 2017
Distinct pathways for snoRNA and mRNA termination
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593888
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29 September 2017
Transcription termination and nuclear degradation of cryptic unstable transcripts: a role for the nrd1-nab3 pathway in genome surveillance
1 reference
stated in
PubMed Central
reference URL
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29 September 2017
Accumulation of unstable promoter-associated transcripts upon loss of the nuclear exosome subunit Rrp6p in Saccharomyces cerevisiae
1 reference
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PubMed Central
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29 September 2017
A nuclear surveillance pathway for mRNAs with defective polyadenylation.
1 reference
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PubMed Central
reference URL
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29 September 2017
Small Nucleolar RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593888
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29 September 2017
Functional analysis of yeast snoRNA and snRNA 3'-end formation mediated by uncoupling of cleavage and polyadenylation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593888
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29 September 2017
Yeast snoRNA accumulation relies on a cleavage-dependent/polyadenylation-independent 3'-processing apparatus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593888
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29 September 2017
Depletion of yeast RNase III blocks correct U2 3' end formation and results in polyadenylated but functional U2 snRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593888
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29 September 2017
The Glc7 phosphatase subunit of the cleavage and polyadenylation factor is essential for transcription termination on snoRNA genes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593888
retrieved
2 June 2018
Transcription termination and RNA degradation contribute to silencing of RNA polymerase II transcription within heterochromatin
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593888
retrieved
2 June 2018
Inactivation of cleavage factor I components Rna14p and Rna15p induces sequestration of small nucleolar ribonucleoproteins at discrete sites in the nucleus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593888
retrieved
27 November 2018
Coupling termination of transcription to messenger RNA maturation in yeast.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2593888
retrieved
27 November 2018
Phosphorylation of the RNA polymerase II C-terminal domain dictates transcription termination choice
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18951092
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Regulation of yeast NRD1 expression by premature transcription termination
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18951092
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.MOLCEL.2008.10.003
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3529527
OpenCitations bibliographic resource ID
3529527
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3529527
PMCID
2593888
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3529527
PubMed ID
18951092
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3529527
ResearchGate publication ID
23414395
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