(Q28082540)

protein function prediction

main subject

0 references

computational biology

1 reference

based on heuristic

inferred from title

computational intelligence

1 reference

Rajeev Srivastava

2

0 references

author name string

Arvind Kumar Tiwari

series ordinal

1

1 reference

language of work or name

1 reference

2014

1 reference

International Journal of Proteomics

published in

1 reference

volume

2014

1 reference

page(s)

845479

1 reference

Creative Commons Attribution 3.0 Unported

copyright license

start time

11 December 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

BindN+ for accurate prediction of DNA and RNA-binding residues from protein sequence features

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Kernel-based machine learning protocol for predicting DNA-binding proteins

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Protein subcellular localization prediction for Gram-negative bacteria using amino acid subalphabets and a combination of multiple support vector machines

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

GPCRsclass: a web tool for the classification of amine type of G-protein-coupled receptors

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

pSLIP: SVM based protein subcellular localization prediction using multiple physicochemical properties

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

PSSM-based prediction of DNA binding sites in proteins

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Knowledge-based analysis of microarray gene expression data by using support vector machines

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

20 March 2017

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Improved tools for biological sequence comparison

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Basic local alignment search tool

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

MultiLoc: prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs and amino acid composition

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Support vector machine-based method for subcellular localization of human proteins using amino acid compositions, their order, and similarity search

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

iNR-PhysChem: a sequence-based predictor for identifying nuclear receptors and their subfamilies via physical-chemical property matrix

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

NR-2L: a two-level predictor for identifying nuclear receptor subfamilies based on sequence-derived features

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Predicting protein ligand binding sites by combining evolutionary sequence conservation and 3D structure

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Identification of DNA-binding proteins using support vector machine with sequence information

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of novel archaeal enzymes from sequence-derived features

7 April 2017

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Prediction of multi-type membrane proteins in human by an integrated approach.

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

A novel approach for protein subcellular location prediction using amino acid exposure

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Protein function prediction by collective classification with explicit and implicit edges in protein-protein interaction networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Going the distance for protein function prediction: a new distance metric for protein interaction networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

NETAL: a new graph-based method for global alignment of protein-protein interaction networks.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

On the structural context and identification of enzyme catalytic residues

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Accurate prediction of protein enzymatic class by N-to-1 Neural Networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Structure based function prediction of proteins using fragment library frequency vectors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Discriminative local subspaces in gene expression data for effective gene function prediction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

A top-down approach to classify enzyme functional classes and sub-classes using random forest

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Predicting protein submitochondria locations by combining different descriptors into the general form of Chou's pseudo amino acid composition

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

iDNA-Prot: identification of DNA binding proteins using random forest with grey model

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of RNA-binding proteins by voting systems

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Support vector machine prediction of enzyme function with conjoint triad feature and hierarchical context

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Structure-based prediction of RNA-binding domains and RNA-binding sites and application to structural genomics targets.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

A novel method for predicting protein subcellular localization based on pseudo amino acid composition

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

An improved classification of G-protein-coupled receptors using sequence-derived features.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Machine learning methods for metabolic pathway prediction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Using the concept of Chou's pseudo amino acid composition to predict enzyme family classes: an approach with support vector machine based on discrete wavelet transform

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Exploiting structural and topological information to improve prediction of RNA-protein binding sites

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

SherLoc2: a high-accuracy hybrid method for predicting subcellular localization of proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Identification of protein functions using a machine-learning approach based on sequence-derived properties

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Improving structure-based function prediction using molecular dynamics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of DNA-binding residues from protein sequence information using random forests

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of G-protein-coupled receptor classes in low homology using Chou's pseudo amino acid composition with approximate entropy and hydrophobicity patterns

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Predicting RNA-binding sites of proteins using support vector machines and evolutionary information

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of DNA-binding residues in proteins from amino acid sequences using a random forest model with a hybrid feature

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Predicting protein subcellular location using Chou's pseudo amino acid composition and improved hybrid approach

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

DBD-Hunter: a knowledge-based method for the prediction of DNA-protein interactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Building pathway clusters from Random Forests classification using class votes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Identification of catalytic residues from protein structure using support vector machine with sequence and structural features.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Enhanced performance in prediction of protein active sites with THEMATICS and support vector machines

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Subcellular location prediction of proteins using support vector machines with alignment of block sequences utilizing amino acid composition

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Robust recognition of zinc binding sites in proteins.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Incorporating prior knowledge of gene functional groups into regularized discriminant analysis of microarray data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

EzyPred: a top-down approach for predicting enzyme functional classes and subclasses

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Support Vector Machine-based method for predicting subcellular localization of mycobacterial proteins using evolutionary information and motifs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of DNA-binding residues from sequence

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Using Chou's amphiphilic pseudo-amino acid composition and support vector machine for prediction of enzyme subfamily classes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Predicting DNA-binding proteins: approached from Chou's pseudo amino acid composition and other specific sequence features

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Improving gene set analysis of microarray data by SAM-GS.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

ECS: an automatic enzyme classifier based on functional domain composition

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of the functional class of metal-binding proteins from sequence derived physicochemical properties by support vector machine approach

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

DP-Bind: a web server for sequence-based prediction of DNA-binding residues in DNA-binding proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of protein subcellular localization by support vector machines using multi-scale energy and pseudo amino acid composition

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Systematic gene function prediction from gene expression data by using a fuzzy nearest-cluster method

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Using pseudo-amino acid composition and support vector machine to predict protein structural class.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

BindN: a web-based tool for efficient prediction of DNA and RNA binding sites in amino acid sequences.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Recent progresses in the application of machine learning approach for predicting protein functional class independent of sequence similarity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of RNA binding sites in proteins from amino acid sequence

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of catalytic residues using Support Vector Machine with selected protein sequence and structural properties

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Predicting enzyme class from protein structure using Bayesian classification.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Identification of functional modules in protein complexes via hyperclique pattern discovery.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

GPCRpred: an SVM-based method for prediction of families and subfamilies of G-protein coupled receptors.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of protein function from protein sequence and structure

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of protein function using protein-protein interaction data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Recognizing the fold of a protein structure.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

SVM-Prot: Web-based support vector machine software for functional classification of a protein from its primary sequence

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Systematic learning of gene functional classes from DNA array expression data by using multilayer perceptrons

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Analysis and visualization of gene expression data using self-organizing maps

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Functional inferences from reconstructed evolutionary biology involving rectified databases--an evolutionarily grounded approach to functional genomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Analysis of gene expression data using self-organizing maps

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Machine learning approaches for the prediction of signal peptides and other protein sorting signals

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Effective protein sequence comparison

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

The PROSITE database, its status in 1995.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

PRINTS--a database of protein motif fingerprints.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Sequence based prediction of DNA-binding proteins based on hybrid feature selection using random forest and Gaussian naïve Bayes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of detailed enzyme functions and identification of specificity determining residues by random forests.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Signal-BNF: a Bayesian network fusing approach to predict signal peptides

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Exploiting indirect neighbours and topological weight to predict protein function from protein-protein interactions

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

MemType-2L: a web server for predicting membrane proteins and their types by incorporating evolution information through Pse-PSSM.

2 June 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Analysis and prediction of DNA-binding proteins and their binding residues based on composition, sequence and structural information

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Using evolutionary and structural information to predict DNA-binding sites on DNA-binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

PreDNA: accurate prediction of DNA-binding sites in proteins by integrating sequence and geometric structure information.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Prediction of RNA binding sites in a protein using SVM and PSSM profile.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Prediction of RNA-binding residues in proteins from primary sequence using an enriched random forest model with a novel hybrid feature.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Predicting rRNA-, RNA-, and DNA-binding proteins from primary structure with support vector machines.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Support vector machine approach for protein subcellular localization prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Using Functional Domain Composition and Support Vector Machines for Prediction of Protein Subcellular Location

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

PSLpred: prediction of subcellular localization of bacterial proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Prediction of protein subcellular locations using fuzzy k-NN method

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Prediction of protein subcellular location using a combined feature of sequence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Prediction of subcellular protein localization based on functional domain composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

ProLoc: prediction of protein subnuclear localization using SVM with automatic selection from physicochemical composition features.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Using functional domain composition to predict enzyme family classes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Accurate prediction of enzyme subfamily class using an adaptive fuzzy k-nearest neighbor method

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Efficiency analysis of KNN and minimum distance-based classifiers in enzyme family prediction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Prediction protein structural classes with pseudo-amino acid composition: approximate entropy and hydrophobicity pattern.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Prediction of Enzyme Subfamily Class via Pseudo Amino Acid Composition by Incorporating the Conjoint Triad Feature

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Signal-3L: A 3-layer approach for predicting signal peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

High-accuracy prediction of bacterial type III secreted effectors based on position-specific amino acid composition profiles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Using a neural network and spatial clustering to predict the location of active sites in enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

An improved prediction of catalytic residues in enzyme structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Classification of nuclear receptors based on amino acid composition and dipeptide composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Prediction of nuclear receptors with optimal pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Classification of G-protein coupled receptors at four levels.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Fuzzy KNN for predicting membrane protein types from pseudo-amino acid composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Using amino acid and peptide composition to predict membrane protein types.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Whole-proteome prediction of protein function via graph-theoretic analysis of interaction maps

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Molecular function prediction using neighborhood features

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

Function-function correlated multi-label protein function prediction over interaction networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

A genetic programming-based approach to the classification of multiclass microarray datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

A pathway analysis method for genome-wide association studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

A support vector machine approach for detecting gene-gene interaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

An ensemble framework for clustering protein-protein interaction networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2014%2F845479

A machine learning based method for the prediction of secretory proteins using amino acid composition, their order and similarity-search.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Prediction of signal peptides in protein sequences by neural networks.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4276698

Predicting subcellular localization of gram-negative bacterial proteins by linear dimensionality reduction method

27 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/25574395

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

An integrated probabilistic model for functional prediction of proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/25574395

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1155/2014/845479

1 reference

1 reference

1 reference

PubMed publication ID

25574395

1 reference