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Preventing replication fork collapse to maintain genome integrity
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title
Preventing replication fork collapse to maintain genome integrity
(English)
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author name string
David Cortez
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1
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language of work or name
English
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publication date
August 2015
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PubMed
published in
DNA Repair
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PubMed
volume
32
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PubMed
page(s)
149-57
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PubMed
cites work
A structure-specific nucleic acid-binding domain conserved among DNA repair proteins
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Repriming of DNA synthesis at stalled replication forks by human PrimPol
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20 March 2017
PrimPol, an archaic primase/polymerase operating in human cells
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PubMed Central
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20 March 2017
Polyubiquitinated PCNA recruits the ZRANB3 translocase to maintain genomic integrity after replication stress
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PubMed Central
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20 March 2017
The annealing helicase HARP is recruited to DNA repair sites via an interaction with RPA
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PubMed Central
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20 March 2017
The SIOD disorder protein SMARCAL1 is an RPA-interacting protein involved in replication fork restart
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20 March 2017
Separate roles for the DNA damage checkpoint protein kinases in stabilizing DNA replication forks.
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20 March 2017
The Werner and Bloom syndrome proteins catalyze regression of a model replication fork
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PubMed Central
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20 March 2017
Molecular anatomy and regulation of a stable replisome at a paused eukaryotic DNA replication fork.
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20 March 2017
Functional uncoupling of MCM helicase and DNA polymerase activities activates the ATR-dependent checkpoint.
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20 March 2017
Minichromosome maintenance proteins are direct targets of the ATM and ATR checkpoint kinases
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20 March 2017
S-phase checkpoint proteins Tof1 and Mrc1 form a stable replication-pausing complex
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20 March 2017
Activation of mammalian Chk1 during DNA replication arrest: a role for Chk1 in the intra-S phase checkpoint monitoring replication origin firing
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Chk1 is an essential kinase that is regulated by Atr and required for the G(2)/M DNA damage checkpoint
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20 March 2017
Dpb11 controls the association between DNA polymerases alpha and epsilon and the autonomously replicating sequence region of budding yeast
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20 March 2017
Differential assembly of Cdc45p and DNA polymerases at early and late origins of DNA replication
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20 March 2017
A suppressor of two essential checkpoint genes identifies a novel protein that negatively affects dNTP pools
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20 March 2017
Recovery from DNA replicational stress is the essential function of the S-phase checkpoint pathway
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20 March 2017
Fork reversal and ssDNA accumulation at stalled replication forks owing to checkpoint defects
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20 March 2017
ATR and ATRIP: partners in checkpoint signaling
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20 March 2017
Replication protein A phosphorylation and the cellular response to DNA damage
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20 March 2017
Identification and characterization of SMARCAL1 protein complexes
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20 March 2017
The Werner syndrome helicase/exonuclease processes mobile D-loops through branch migration and degradation
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20 March 2017
ATR disruption leads to chromosomal fragmentation and early embryonic lethality
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20 March 2017
ATR: an essential regulator of genome integrity
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PubMed Central
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7 April 2017
Regulation of DNA replication fork progression through damaged DNA by the Mec1/Rad53 checkpoint
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7 April 2017
The importance of repairing stalled replication forks
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7 April 2017
The DNA replication checkpoint response stabilizes stalled replication forks
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7 April 2017
The localization of replication origins on ARS plasmids in S. cerevisiae
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7 April 2017
FBH1 Catalyzes Regression of Stalled Replication Forks.
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29 September 2017
Rad51-mediated replication fork reversal is a global response to genotoxic treatments in human cells
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29 September 2017
DNA2 drives processing and restart of reversed replication forks in human cells.
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29 September 2017
High-affinity DNA-binding domains of replication protein A (RPA) direct SMARCAL1-dependent replication fork remodeling
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29 September 2017
Holliday junction processing enzymes as guardians of genome stability
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29 September 2017
Phosphorylated RPA recruits PALB2 to stalled DNA replication forks to facilitate fork recovery
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29 September 2017
The dissolution of double Holliday junctions
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29 September 2017
Causes and consequences of replication stress
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29 September 2017
ATR prohibits replication catastrophe by preventing global exhaustion of RPA.
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29 September 2017
RNF4 and PLK1 are required for replication fork collapse in ATR-deficient cells
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PubMed Central
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29 September 2017
Break-induced DNA replication
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29 September 2017
ATR phosphorylates SMARCAL1 to prevent replication fork collapse
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PubMed Central
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29 September 2017
Break-induced replication: functions and molecular mechanism
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29 September 2017
Substrate-selective repair and restart of replication forks by DNA translocases
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29 September 2017
Oncogenes induce genotoxic stress by mitotic processing of unusual replication intermediates.
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29 September 2017
Human RECQ1 promotes restart of replication forks reversed by DNA topoisomerase I inhibition
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29 September 2017
Direct observation of stalled fork restart via fork regression in the T4 replication system.
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29 September 2017
Continued DNA synthesis in replication checkpoint mutants leads to fork collapse
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29 September 2017
Local and global functions of Timeless and Tipin in replication fork protection
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29 September 2017
Preserving the genome by regulating chromatin association with the nuclear envelope
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29 September 2017
R loops: from transcription byproducts to threats to genome stability
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29 September 2017
Topoisomerase I poisoning results in PARP-mediated replication fork reversal
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29 September 2017
SMARCAL1 catalyzes fork regression and Holliday junction migration to maintain genome stability during DNA replication
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29 September 2017
RAD51- and MRE11-dependent reassembly of uncoupled CMG helicase complex at collapsed replication forks
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29 September 2017
DNA replication: failures and inverted fusions
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29 September 2017
Analysis of mutations that dissociate G(2) and essential S phase functions of human ataxia telangiectasia-mutated and Rad3-related (ATR) protein kinase
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29 September 2017
Coordinated protein and DNA remodeling by human HLTF on stalled replication fork
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29 September 2017
The Werner and Bloom syndrome proteins help resolve replication blockage by converting (regressed) holliday junctions to functional replication forks
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29 September 2017
Analysis of protein dynamics at active, stalled, and collapsed replication forks.
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29 September 2017
ATR signalling: more than meeting at the fork
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29 September 2017
SMARCAL1 and replication stress: an explanation for SIOD?
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29 September 2017
The ATR barrier to replication-born DNA damage.
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29 September 2017
Eukaryotic DNA replication origins: many choices for appropriate answers
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29 September 2017
ATR and ATM differently regulate WRN to prevent DSBs at stalled replication forks and promote replication fork recovery
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29 September 2017
Maintaining genome stability at the replication fork
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29 September 2017
Recruitment to stalled replication forks of the PriA DNA helicase and replisome-loading activities is essential for survival
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29 September 2017
Identification of SMARCAL1 as a component of the DNA damage response
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29 September 2017
The annealing helicase HARP protects stalled replication forks
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PubMed Central
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29 September 2017
The annealing helicase SMARCAL1 maintains genome integrity at stalled replication forks
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PubMed Central
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29 September 2017
Replication fork stalling in WRN-deficient cells is overcome by prompt activation of a MUS81-dependent pathway
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29 September 2017
Remodeling of DNA replication structures by the branch point translocase FANCM
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29 September 2017
Excess MCM proteins protect human cells from replicative stress by licensing backup origins of replication.
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29 September 2017
An oncogene-induced DNA damage model for cancer development
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29 September 2017
Plx1 is required for chromosomal DNA replication under stressful conditions
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29 September 2017
The Fanconi anemia protein FANCM can promote branch migration of Holliday junctions and replication forks
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29 September 2017
Dormant origins licensed by excess Mcm2-7 are required for human cells to survive replicative stress.
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29 September 2017
Replication in hydroxyurea: it's a matter of time
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29 September 2017
Replication foci dynamics: replication patterns are modulated by S-phase checkpoint kinases in fission yeast.
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29 September 2017
Excess Mcm2-7 license dormant origins of replication that can be used under conditions of replicative stress.
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29 September 2017
ATM and ATR promote Mre11 dependent restart of collapsed replication forks and prevent accumulation of DNA breaks
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29 September 2017
Replisome instability, fork collapse, and gross chromosomal rearrangements arise synergistically from Mec1 kinase and RecQ helicase mutations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
29 September 2017
Mcm2 is a direct substrate of ATM and ATR during DNA damage and DNA replication checkpoint responses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
29 September 2017
Phosphorylation of the Bloom's syndrome helicase and its role in recovery from S-phase arrest
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
29 September 2017
DNA polymerase stabilization at stalled replication forks requires Mec1 and the RecQ helicase Sgs1.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
29 September 2017
Maintenance of genome stability in Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
29 September 2017
Characterization of mec1 kinase-deficient mutants and of new hypomorphic mec1 alleles impairing subsets of the DNA damage response pathway
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
29 September 2017
Temporally coordinated assembly and disassembly of replication factories in the absence of DNA synthesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
29 September 2017
Analysis of DNA replication forks encountering a pyrimidine dimer in the template to the leading strand
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
29 September 2017
Replicon clusters are stable units of chromosome structure: evidence that nuclear organization contributes to the efficient activation and propagation of S phase in human cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
29 September 2017
Alignment and Sensitive Detection of DNA by a Moving Interface
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
29 September 2017
Production of DNA bifilarly substituted with bromodeoxyuridine in the first round of synthesis: branch migration during isolation of cellular DNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
29 September 2017
Measurement of radiation-induced DNA double-strand breaks by pulsed-field gel electrophoresis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
2 June 2018
Strand-specific analysis shows protein binding at replication forks and PCNA unloading from lagging strands when forks stall
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
27 November 2018
Friedreich's ataxia-associated GAA repeats induce replication-fork reversal and unusual molecular junctions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
27 November 2018
The intra-S phase checkpoint targets Dna2 to prevent stalled replication forks from reversing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
27 November 2018
Replisome stability at defective DNA replication forks is independent of S phase checkpoint kinases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
27 November 2018
Exo1 processes stalled replication forks and counteracts fork reversal in checkpoint-defective cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
27 November 2018
Visualization of altered replication dynamics after DNA damage in human cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
27 November 2018
Checkpoint-mediated control of replisome–fork association and signalling in response to replication pausing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
27 November 2018
A central role for DNA replication forks in checkpoint activation and response
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
27 November 2018
Visualization of DNA replication on individual Epstein-Barr virus episomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4522347
retrieved
27 November 2018
Role for BLM in replication-fork restart and suppression of origin firing after replicative stress
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25957489
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Cell proliferation as a requirement for development of the contact effect in Chinese hamster V79 spheroids
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25957489
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.DNAREP.2015.04.026
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1612498
OpenCitations bibliographic resource ID
1612498
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1612498
PMC publication ID
4522347
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1612498
PubMed publication ID
25957489
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1612498
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