(Q28472764)

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In silico analysis of the apolipoprotein E and the amyloid beta peptide interaction: misfolding induced by frustration of the salt bridge network

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scholarly article

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In silico analysis of the apolipoprotein E and the amyloid beta peptide interaction: misfolding induced by frustration of the salt bridge network (English)

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1 reference

based on heuristic

inferred from title

Astrid Gräslund

4

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object named as

Jinghui Luo

1

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Jean-Didier Maréchal

object named as

Jean-Didier Maréchal

2

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author name string

Sebastian Wärmländer

3

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Alex Perálvarez-Marín

5

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language of work or name

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publication date

5 February 2010

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PLOS Computational Biology

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6

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2

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e1000663

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copyright license

Creative Commons Attribution 4.0 International

5 February 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

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Structural basis for the recognition and cross-linking of amyloid fibrils by human apolipoprotein E

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

19 March 2017

GROMACS: fast, flexible, and free

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

19 March 2017

PatchDock and SymmDock: servers for rigid and symmetric docking

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

19 March 2017

UCSF Chimera--a visualization system for exploratory research and analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

19 March 2017

Apolipoprotein E: diversity of cellular origins, structural and biophysical properties, and effects in Alzheimer's disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

19 March 2017

Solution structure of amyloid beta-peptide(1-40) in a water-micelle environment. Is the membrane-spanning domain where we think it is?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

19 March 2017

Apolipoprotein E: high-avidity binding to beta-amyloid and increased frequency of type 4 allele in late-onset familial Alzheimer disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

19 March 2017

Gene dose of apolipoprotein E type 4 allele and the risk of Alzheimer's disease in late onset families

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

19 March 2017

Human apolipoprotein E. Role of arginine 61 in mediating the lipoprotein preferences of the E3 and E4 isoforms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

19 March 2017

Salt bridge relay triggers defective LDL receptor binding by a mutant apolipoprotein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

19 March 2017

Three-dimensional structure of the LDL receptor-binding domain of human apolipoprotein E

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

19 March 2017

Isoform-specific binding of apolipoprotein E to beta-amyloid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

19 March 2017

FireDock: a web server for fast interaction refinement in molecular docking

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

29 September 2017

Role of electrostatic interactions in amyloid beta-protein (A beta) oligomer formation: a discrete molecular dynamics study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

29 September 2017

Blocking the apolipoprotein E/amyloid-beta interaction as a potential therapeutic approach for Alzheimer's disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

29 September 2017

Apolipoprotein (apo) E4 enhances amyloid beta peptide production in cultured neuronal cells: apoE structure as a potential therapeutic target

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

29 September 2017

In silico study of amyloid beta-protein folding and oligomerization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

29 September 2017

ApoE genotype accounts for the vast majority of AD risk and AD pathology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

29 September 2017

Comparison of the stabilities and unfolding pathways of human apolipoprotein E isoforms by differential scanning calorimetry and circular dichroism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

29 September 2017

Binding of human apolipoprotein E to synthetic amyloid beta peptide: isoform-specific effects and implications for late-onset Alzheimer disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

29 September 2017

Apolipoprotein E: structure-function relationships

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

29 September 2017

Human apolipoprotein E4 domain interaction. Arginine 61 and glutamic acid 255 interact to direct the preference for very low density lipoproteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2816681

2 June 2018

Effects of polymorphism on the lipid interaction of human apolipoprotein E.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000663

21 January 2018

Characterization of the heparin binding sites in human apolipoprotein E.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000663

21 January 2018

Differences in stability among the human apolipoprotein E isoforms determined by the amino-terminal domain

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000663

21 January 2018

Secondary structure conversions of Alzheimer's Abeta(1-40) peptide induced by membrane-mimicking detergents

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000663

21 January 2018

Analysis of the structural and dynamic properties of human N-terminal domain of apolipoprotein E by molecular dynamics simulations

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000663

21 January 2018

Salt-specific stability and denaturation of a short salt-bridge-forming alpha-helix

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000663

21 January 2018

Apolipoprotein E4 forms a molten globule. A potential basis for its association with disease.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000663

21 January 2018

An apolipoprotein E-based therapeutic improves outcome and reduces Alzheimer's disease pathology following closed head injury: evidence of pharmacogenomic interaction.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000663

21 January 2018

Human apolipoprotein E. Determination of the heparin binding sites of apolipoprotein E3

1 reference

https://pubmed.ncbi.nlm.nih.gov/20140182

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Apolipoprotein E polymorphism and atherosclerosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/20140182

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Opposing effects of apolipoproteins E and C on lipoprotein binding to low density lipoprotein receptor-related protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/20140182

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Apolipoprotein E: binding to soluble Alzheimer's beta-amyloid

1 reference

https://pubmed.ncbi.nlm.nih.gov/20140182

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PCBI.1000663

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DBLP publication ID

journals/ploscb/LuoMWGP10

1 reference

DBLP Dataset 2021-01-02

28 January 2021

PMC publication ID

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PubMed publication ID

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ResearchGate publication ID

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