(Q34374164)

1 August 2017

title

In silico study of amyloid beta-protein folding and oligomerization (English)

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1 August 2017

0 references

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7

H E Stanley

1 reference

1 August 2017

4

S V Buldyrev

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1 August 2017

1

B Urbanc

1 reference

1 August 2017

L Cruz

2

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1 August 2017

S Yun

series ordinal

3

1 reference

1 August 2017

G Bitan

series ordinal

5

1 reference

1 August 2017

D B Teplow

series ordinal

6

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1 August 2017

language of work or name

English

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publication date

6 December 2004

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Proceedings of the National Academy of Sciences of the United States of America

1 August 2017

published in

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1 August 2017

volume

101

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1 August 2017

issue

50

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1 August 2017

page(s)

17345-17350

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Molecular dynamics simulation of amyloid beta dimer formation

1 August 2017

cites work

1 reference

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STRIDE: a web server for secondary structure assignment from known atomic coordinates of proteins

6 July 2018

1 reference

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Mechanism for the alpha-helix to beta-hairpin transition

6 July 2018

1 reference

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Alzheimer's disease-affected brain: presence of oligomeric A beta ligands (ADDLs) suggests a molecular basis for reversible memory loss

6 July 2018

1 reference

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Common structure of soluble amyloid oligomers implies common mechanism of pathogenesis

6 July 2018

1 reference

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Amyloid beta -protein (Abeta) assembly: Abeta 40 and Abeta 42 oligomerize through distinct pathways

6 July 2018

1 reference

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Direct molecular dynamics observation of protein folding transition state ensemble

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

Molecular dynamics simulation of the SH3 domain aggregation suggests a generic amyloidogenesis mechanism

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

Solution structure of the Alzheimer amyloid beta-peptide (1-42) in an apolar microenvironment. Similarity with a virus fusion domain

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

Absolute comparison of simulated and experimental protein-folding dynamics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

Simulation of folding of a small alpha-helical protein in atomistic detail using worldwide-distributed computing

6 July 2018

1 reference

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Paradigm shifts in Alzheimer's disease and other neurodegenerative disorders: the emerging role of oligomeric assemblies

6 July 2018

1 reference

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Thermodynamics and folding kinetics analysis of the SH3 domain form discrete molecular dynamics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

Naturally secreted oligomers of amyloid beta protein potently inhibit hippocampal long-term potentiation in vivo

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

The relationship between Abeta and memory in the Tg2576 mouse model of Alzheimer's disease.

6 July 2018

1 reference

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Structure determination of micelle-like intermediates in amyloid beta -protein fibril assembly by using small angle neutron scattering

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

alpha-helix formation: discontinuous molecular dynamics on an intermediate-resolution protein model

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

Amyloid beta-protein oligomerization: prenucleation interactions revealed by photo-induced cross-linking of unmodified proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

Non-fibrillar oligomeric species of the amyloid ABri peptide, implicated in familial British dementia, are more potent at inducing apoptotic cell death than protofibrils or mature fibrils

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

High-level neuronal expression of abeta 1-42 in wild-type human amyloid protein precursor transgenic mice: synaptotoxicity without plaque formation

6 July 2018

1 reference

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6 July 2018

The Protein Data Bank

1 reference

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Plaque-independent disruption of neural circuits in Alzheimer's disease mouse models

6 July 2018

1 reference

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Discrete molecular dynamics studies of the folding of a protein-like model.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

Solution structure of amyloid beta-peptide(1-40) in a water-micelle environment. Is the membrane-spanning domain where we think it is?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

Diffusible, nonfibrillar ligands derived from Abeta1-42 are potent central nervous system neurotoxins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

Folding thermodynamics of a model three-helix-bundle protein.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

Knowledge-based protein secondary structure assignment

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

VMD: visual molecular dynamics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

A simple method for displaying the hydropathic character of a protein

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

Amyloid beta-protein fibrillogenesis. Detection of a protofibrillar intermediate.

6 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408153101

Atomic force microscopic imaging of seeded fibril formation and fibril branching by the Alzheimer's disease amyloid-beta protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408153101

Oligomerization and toxicity of beta-amyloid-42 implicated in Alzheimer's disease.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408153101

Immunization reverses memory deficits without reducing brain Abeta burden in Alzheimer's disease model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408153101

Elucidation of primary structure elements controlling early amyloid beta-protein oligomerization.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408153101

A molecular switch in amyloid assembly: Met35 and amyloid beta-protein oligomerization

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408153101

Beta-hairpin conformation of fibrillogenic peptides: structure and alpha-beta transition mechanism revealed by molecular dynamics simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408153101

Folding of a model three-helix bundle protein: a thermodynamic and kinetic analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408153101

Protein refolding versus aggregation: computer simulations on an intermediate-resolution protein model

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408153101

Self-assembly of Abeta(1-42) into globular neurotoxins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0408153101

Protofibrillar intermediates of amyloid beta-protein induce acute electrophysiological changes and progressive neurotoxicity in cortical neurons.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=536046

27 October 2018

Identifiers

DOI

10.1073/PNAS.0408153101

1 reference

1 August 2017

0 references

1 reference

1 August 2017

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