(Q28537670)

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Alteration of protein levels during influenza virus H1N1 infection in host cells: a proteomic survey of host and virus reveals differential dynamics

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Alteration of protein levels during influenza virus H1N1 infection in host cells: a proteomic survey of host and virus reveals differential dynamics (English)

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7

object named as

Edda Klipp

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object named as

Susann Kummer

1

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Christian Sieben

object named as

Christian Sieben

4

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Andreas Herrmann

8

object named as

Andreas Herrmann

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author name string

Max Flöttmann

2

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Björn Schwanhäusser

3

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Michael Veit

5

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Matthias Selbach

6

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publication date

2014

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9

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4

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e94257

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Creative Commons Attribution 4.0 International

9 April 2014

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April 2022 Public Data File from Crossref

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Suppression of the antiviral response by an influenza histone mimic

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A physical and regulatory map of host-influenza interactions reveals pathways in H1N1 infection

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Human host factors required for influenza virus replication

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Global analysis of cellular protein translation by pulsed SILAC

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A practical recipe for stable isotope labeling by amino acids in cell culture (SILAC)

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Stable isotope labeling with amino acids in cell culture (SILAC) for studying dynamics of protein abundance and posttranslational modifications

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Assembly and budding of influenza virus

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Bioconductor: open software development for computational biology and bioinformatics

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19 March 2017

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

1 reference

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Karyopherins and nuclear import

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19 March 2017

Internal ribosome entry sites in eukaryotic mRNA molecules

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19 March 2017

Influenza virus NS1 protein counteracts PKR-mediated inhibition of replication.

1 reference

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19 March 2017

Gene ontology: tool for the unification of biology

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KEGG: kyoto encyclopedia of genes and genomes

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19 March 2017

Influenza A virus NS1 protein targets poly(A)-binding protein II of the cellular 3'-end processing machinery

1 reference

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19 March 2017

Influenza virus NS1 protein interacts with the cellular 30 kDa subunit of CPSF and inhibits 3'end formation of cellular pre-mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3981805

19 March 2017

Structure of influenza virus RNP. I. Influenza virus nucleoprotein melts secondary structure in panhandle RNA and exposes the bases to the solvent

1 reference

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Uncoating protein (hsc70) binds a conformationally labile domain of clathrin light chain LCa to stimulate ATP hydrolysis

1 reference

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19 March 2017

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

1 reference

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7 April 2017

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

1 reference

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7 April 2017

Andromeda: a peptide search engine integrated into the MaxQuant environment

1 reference

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7 April 2017

RNA interference screen for human genes associated with West Nile virus infection

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7 April 2017

Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips

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7 April 2017

Using GOstats to test gene lists for GO term association

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7 April 2017

Systems virology: host-directed approaches to viral pathogenesis and drug targeting

1 reference

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29 September 2017

A quantitative proteomic analysis of lung epithelial (A549) cells infected with 2009 pandemic influenza A virus using stable isotope labelling with amino acids in cell culture

1 reference

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29 September 2017

Predicting the pathogenesis of influenza from genomic response: a step toward early diagnosis

1 reference

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Effect of sorafenib on the energy metabolism of hepatocellular carcinoma cells

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29 September 2017

Influenza A virus nucleoprotein exploits Hsp40 to inhibit PKR activation

1 reference

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29 September 2017

Quantitative subcellular proteome and secretome profiling of influenza A virus-infected human primary macrophages

1 reference

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29 September 2017

How viruses hijack cell regulation

1 reference

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29 September 2017

Quantitative proteomic analyses of influenza virus-infected cultured human lung cells

1 reference

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29 September 2017

Quantitative proteomics using SILAC coupled to LC-MS/MS reveals changes in the nucleolar proteome in influenza A virus-infected cells

1 reference

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29 September 2017

Cellular networks involved in the influenza virus life cycle

1 reference

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29 September 2017

Influenza A virus polymerase: structural insights into replication and host adaptation mechanisms

1 reference

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29 September 2017

Metabolic effects of influenza virus infection in cultured animal cells: Intra- and extracellular metabolite profiling

1 reference

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29 September 2017

Glycolysis links p53 function with NF-kappaB signaling: impact on cancer and aging process

1 reference

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29 September 2017

Genome-wide RNAi screen identifies human host factors crucial for influenza virus replication.

1 reference

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29 September 2017

Population context determines cell-to-cell variability in endocytosis and virus infection

1 reference

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29 September 2017

Advanced glycation end product accumulation in rho(0) cells without a functional respiratory chain

1 reference

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29 September 2017

How common are extraribosomal functions of ribosomal proteins?

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29 September 2017

A novel signaling pathway impact analysis.

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29 September 2017

Comparative proteomic phenotyping of cell lines and primary cells to assess preservation of cell type-specific functions

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29 September 2017

Contact structures in the poultry industry in Great Britain: exploring transmission routes for a potential avian influenza virus epidemic

1 reference

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29 September 2017

Influenza virus hemagglutinin and neuraminidase, but not the matrix protein, are required for assembly and budding of plasmid-derived virus-like particles

1 reference

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29 September 2017

Biology of influenza a virus.

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29 September 2017

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1 reference

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1 reference

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29 September 2017

The influenza virus nucleoprotein: a multifunctional RNA-binding protein pivotal to virus replication.

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29 September 2017

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1 reference

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29 September 2017

Membrane interaction of influenza virus M1 protein

1 reference

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29 September 2017

The M1 and M2 proteins of influenza A virus are important determinants in filamentous particle formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3981805

29 September 2017

The influenza virus NEP (NS2 protein) mediates the nuclear export of viral ribonucleoproteins

1 reference

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29 September 2017

Influenza virus hemagglutinin and neuraminidase cytoplasmic tails control particle shape

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3981805

29 September 2017

The influenza virus NS1 protein is a poly(A)-binding protein that inhibits nuclear export of mRNAs containing poly(A)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3981805

29 September 2017

Influenza virus NS1 protein enhances the rate of translation initiation of viral mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3981805

29 September 2017

Identification of an RNA binding region within the N-terminal third of the influenza A virus nucleoprotein.

1 reference

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29 September 2017

Studies on the adaptation of influenza viruses to MDCK cells

1 reference

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29 September 2017

Influenza virus gene expression: control mechanisms at early and late times of infection and nuclear-cytoplasmic transport of virus-specific RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3981805

29 September 2017

Influenza virus RNA replication in vitro: synthesis of viral template RNAs and virion RNAs in the absence of an added primer

1 reference

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29 September 2017

Regulation of the extent of splicing of influenza virus NS1 mRNA: role of the rates of splicing and of the nucleocytoplasmic transport of NS1 mRNA

1 reference

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29 September 2017

Influenza virus proteins: identity, synthesis, and modification analyzed by two-dimensional gel electrophoresis

1 reference

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29 September 2017

Viruses and interactomes in translation

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3 June 2018

Lipid raft disruption by cholesterol depletion enhances influenza A virus budding from MDCK cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3981805

3 June 2018

Influenza virus NS1 protein interacts with viral transcription-replication complexes in vivo

1 reference

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Enhanced erythropoietin secretion in hepatoblastoma cells in response to hypoxia

1 reference

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3 June 2018

Influenza A infection of primary human airway epithelial cells up-regulates proteins related to purine metabolism and ubiquitin-related signaling.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0094257

21 January 2018

Influenza A virus hemagglutinin containing basolateral localization signal does not alter the apical budding of a recombinant influenza A virus in polarized MDCK cells

1 reference

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21 January 2018

Binding of the influenza virus NS1 protein to double-stranded RNA inhibits the activation of the protein kinase that phosphorylates the elF-2 translation initiation factor

1 reference

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21 January 2018

Identification of host factors that regulate the influenza virus RNA polymerase activity

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0094257

21 January 2018

Transient changes of the conformation of hemagglutinin of influenza virus at low pH detected by time-resolved circular dichroism spectroscopy

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0094257

21 January 2018

Microcolumns with self-assembled particle frits for proteomics

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0094257

21 January 2018

Glycolysis links p53 function with NF-κB signaling: Impact on cancer and aging process

1 reference

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27 November 2018

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1 reference

https://pubmed.ncbi.nlm.nih.gov/24718678

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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1 reference

https://pubmed.ncbi.nlm.nih.gov/24718678

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0094257

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2014PLoSO...994257K

0 references

release_el5a2jqp7vduvec22r2riakoum

1 reference

https://api.fatcat.wiki/v0/release/el5a2jqp7vduvec22r2riakoum

24 November 2022

based on heuristic

mapped directly with Wikidata item

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PubMed publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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