(Q28601504)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

title

Variation in promiscuity and sexual selection drives avian rate of Faster-Z evolution (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Judith E. Mank

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

author name string

Alison E Wright

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Fabian Zimmer

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Stephen H Montgomery

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Marie A Pointer

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

language of work or name

English

0 references

publication date

1 March 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

volume

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

page(s)

1218-1235

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

Whole genome sequencing of the black grouse (Tetrao tetrix): reference guided assembly suggests faster-Z and MHC evolution

1 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

The genomic landscape of species divergence in Ficedula flycatchers

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

VarScan 2: somatic mutation and copy number alteration discovery in cancer by exome sequencing

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Full-length transcriptome assembly from RNA-Seq data without a reference genome

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Sex bias and dosage compensation in the zebra finch versus chicken genomes: general and specialized patterns among birds

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

A scaling normalization method for differential expression analysis of RNA-seq data

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

The Sequence Alignment/Map format and SAMtools

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Fundamental concepts in genetics: Effective population size and patterns of molecular evolution and variation

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

All dosage compensation is local: gene-by-gene regulation of sex-biased expression on the chicken Z chromosome

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Sex chromosome-linked species recognition and evolution of reproductive isolation in flycatchers

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Faced with inequality: chicken do not have a general dosage compensation of sex-linked genes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

A new look at the evolution of avian sex chromosomes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

PAML 4: phylogenetic analysis by maximum likelihood

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Parallel patterns of evolution in the genomes and transcriptomes of humans and chimpanzees

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Bayesian estimation of ancestral character states on phylogenies

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Rate of molecular evolution of the seminal protein gene SEMG2 correlates with levels of female promiscuity

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

The effect of deleterious mutations on neutral molecular variation

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Basic local alignment search tool

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Adaptive protein evolution at the Adh locus in Drosophila

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

On the number of segregating sites in genetical models without recombination

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Inferring the historical patterns of biological evolution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

STAR: ultrafast universal RNA-seq aligner

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

The evolution of gene expression levels in mammalian organs

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Natural selection in avian protein-coding genes expressed in brain

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Sexual selection drives evolution and rapid turnover of male gene expression

9 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Temporal genomic evolution of bird sex chromosomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

SWAMP: Sliding Window Alignment Masker for PAML.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

The role of sex chromosomes in sexual dimorphism: discordance between molecular and phenotypic data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Positive selection drives faster-Z evolution in silkmoths

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

The ontogeny and evolution of sex-biased gene expression in Drosophila melanogaster.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Comparative sex chromosome genomics in snakes: differentiation, evolutionary strata, and lack of global dosage compensation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Masculinization of gene expression is associated with exaggeration of male sexual dimorphism

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Transcriptome sequencing reveals the character of incomplete dosage compensation across multiple tissues in flycatchers.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

The scope and strength of sex-specific selection in genome evolution.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

The faster-X effect: integrating theory and data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Development of strategies for SNP detection in RNA-seq data: application to lymphoblastoid cell lines and evaluation using 1000 Genomes data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Sex-biased gene expression at homomorphic sex chromosomes in emus and its implication for sex chromosome evolution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

The evolutionary causes and consequences of sex-biased gene expression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Genomic variation in natural populations of Drosophila melanogaster

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Rate of amino acid substitution is influenced by the degree and conservation of male-biased transcription over 50 myr of Drosophila evolution.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Impact of genetic architecture on the relative rates of X versus autosomal adaptive substitution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Extensive X-linked adaptive evolution in central chimpanzees

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

No excess gene movement is detected off the avian or lepidopteran Z chromosome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Towards a more nuanced understanding of the relationship between sex-biased gene expression and rates of protein-coding sequence evolution.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Comparative genomics in chicken and Pekin duck using FISH mapping and microarray analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

The W, X, Y and Z of sex-chromosome dosage compensation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Effects of X-linkage and sex-biased gene expression on the rate of adaptive protein evolution in Drosophila

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Population size changes reshape genomic patterns of diversity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Fast-X on the Z: rapid evolution of sex-linked genes in birds

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Discovering motifs in ranked lists of DNA sequences

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Sperm competition and the evolution of testes size in birds

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Genetic biases for showy males: are some genetic systems especially conducive to sexual selection?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Effective population size and population subdivision in demographically structured populations

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Phylogeny of Tetraoninae and other galliform birds using mitochondrial 12S and ND2 genes.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Adaptive evolution of four microcephaly genes and the evolution of brain size in anthropoid primates

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Rapid evolution of female-biased, but not male-biased, genes expressed in the avian brain

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Excess of amino acid substitutions relative to polymorphism between X-linked duplications in Drosophila melanogaster.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737241

Controlling type-I error of the McDonald-Kreitman test in genomewide scans for selection on noncoding DNA.

3 June 2018

1 reference

Male-biased mutation rate and divergence in autosomal, z-linked and w-linked introns of chicken and Turkey

21 January 2018

1 reference

Life history and the male mutation bias.

21 January 2018

1 reference

Origin and evolution of avian microchromosomes

21 January 2018

1 reference

The Relative Rates of Evolution of Sex Chromosomes and Autosomes

21 January 2018

1 reference

The genomic signature of sexual selection in the genetic diversity of the sex chromosomes and autosomes

21 January 2018

1 reference

On the rate of molecular evolution

21 January 2018

1 reference

Male-biased mutation, sex linkage, and the rate of adaptive evolution

21 January 2018

1 reference

QTL and quantitative genetic analysis of beak morphology reveals patterns of standing genetic variation in an Estrildid finch.

21 January 2018

1 reference

Effective population size and the Faster-X effect: empirical results and their interpretation

21 January 2018

1 reference

Faster-Z evolution is predominantly due to genetic drift

21 January 2018

1 reference

Ontogenetic complexity of sexual dimorphism and sex-specific selection.

21 January 2018

1 reference

Peacocks lek with relatives even in the absence of social and environmental cues

21 January 2018

1 reference

Sex chromosome evolution and speciation in Ficedula flycatchers.

21 January 2018

1 reference

Contrasting the efficacy of selection on the X and autosomes in Drosophila.

21 January 2018

1 reference

Calibration of galliform molecular clocks using multiple fossils and genetic partitions

21 January 2018

1 reference

Calibration of avian molecular clocks

21 January 2018

1 reference

Effective population size and the faster-X effect: an extended model

21 January 2018

1 reference

Lineage-specific variation in slow- and fast-X evolution in primates.

21 January 2018

1 reference

Sexual Selection and the Adaptive Evolution of Mammalian Ejaculate Proteins

21 January 2018

1 reference

Sexual selection and sex linkage

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25689782

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

QTL LINKAGE MAPPING OF ZEBRA FINCH BEAK COLOR SHOWS AN OLIGOGENIC CONTROL OF A SEXUALLY SELECTED TRAIT

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25689782

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

SEX CHROMOSOMES AND THE EVOLUTION OF SEXUAL DIMORPHISM.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25689782

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1111/MEC.13113

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

PubMed publication ID

25689782

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25689782%20AND%20SRC:MED&resulttype=core&format=json