(Q28603077)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

title

Gramene 2016: comparative plant genomics and pathway resources (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

0 references

1 reference

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Sushma Naithani

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Dan Bolser

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Arnaud Kerhornou

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Brandon Walts

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Nuno A. Fonseca

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Laura Huerta

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Maria C Keays

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Amy Y Tang

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Helen Parkinson

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Peter D'Eustachio

27

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Robert Petryszak

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Paul J. Kersey

30

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1

Marcela K Tello-Ruiz

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

31

Pankaj Jaiswal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

author name string

Joshua Stein

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Sharon Wei

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Justin Preece

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Andrew Olson

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Vindhya Amarasinghe

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Palitha Dharmawardhana

8

1 reference

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29 February 2020

Yinping Jiao

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Joseph Mulvaney

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Sunita Kumari

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Kapeel Chougule

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Justin Elser

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Bo Wang

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

James Thomason

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Sheldon McKay

25

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Joel Weiser

26

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Doreen Ware

32

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Lincoln Stein

28

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

language of work or name

English

0 references

publication date

8 November 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

volume

44

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

issue

D1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

page(s)

D1133-40

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

Expression Atlas update--a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments

29 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

The Reactome pathway knowledgebase

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Building models using Reactome pathways as templates

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Analysis of the bread wheat genome using whole-genome shotgun sequencing

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

A physical, genetic and functional sequence assembly of the barley genome

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Gramene database in 2010: updates and extensions

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Ensembl variation resources

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

A first-generation haplotype map of maize

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

A genome scale metabolic network for rice and accompanying analysis of tryptophan, auxin and serotonin biosynthesis regulation under biotic stress

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Nascent transcription affected by RNA polymerase IV in Zea mays

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Sequencing and de novo transcriptome assembly of Brachypodium sylvaticum (Poaceae).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

De novo transcriptome assembly and analyses of gene expression during photomorphogenesis in diploid wheat Triticum monococcum

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Construction of pseudomolecule sequences of the aus rice cultivar Kasalath for comparative genomics of Asian cultivated rice

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

The Amborella Genome and the Evolution of Flowering Plants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Gramene 2013: comparative plant genomics resources.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Whole-genome sequencing reveals untapped genetic potential in Africa's indigenous cereal crop sorghum

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

The maize methylome influences mRNA splice sites and reveals widespread paramutation-like switches guided by small RNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

The International Oryza Map Alignment Project: development of a genus-wide comparative genomics platform to help solve the 9 billion-people question

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Population genomic and genome-wide association studies of agroclimatic traits in sorghum

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

The plant ontology as a tool for comparative plant anatomy and genomic analyses

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

The International Nucleotide Sequence Database Collaboration.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Maize HapMap2 identifies extant variation from a genome in flux.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

GrameneMart: the BioMart data portal for the Gramene project

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Genome-wide patterns of genetic variation in sweet and grain sorghum (Sorghum bicolor).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Ensembl Genomes: an integrative resource for genome-scale data from non-vertebrate species.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Multiple reference genomes and transcriptomes for Arabidopsis thaliana

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Genomic diversity and introgression in O. sativa reveal the impact of domestication and breeding on the rice genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Rapid genomic characterization of the genus vitis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Genomewide SNP variation reveals relationships among landraces and modern varieties of rice

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

The oryza map alignment project: the golden path to unlocking the genetic potential of wild rice species

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702844

Assembly and validation of the genome of the nonmodel basal angiosperm Amborella

29 September 2017

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1179

MAKER-P: a tool kit for the rapid creation, management, and quality control of plant genome annotations

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1179

Automated update, revision, and quality control of the maize genome annotations using MAKER-P improves the B73 RefGen_v3 gene models and identifies new genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1179

Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1179

Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1179

21 January 2018

Identifiers

DOI

10.1093/NAR/GKV1179

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/Tello-RuizSWPON16

29 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

PubMed publication ID

26553803

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26553803%20AND%20SRC:MED&resulttype=core&format=json