(Q28709284)

21 June 2017

The genome of the pear (Pyrus bretschneideri Rehd.). (English)

1 reference

21 June 2017

0 references

Pyrus × bretschneideri

Pyrus bretschneideri

1 reference

56

Junyi Wang

1 reference

21 June 2017

Cao Deng

20

0 references

Hao Wang

Hao Wang

10

0 references

Leiting Li

Leiting Li

32

0 references

Jun Wang

Jun Wang

59

0 references

Chunlei Wang

Chunlei Wang

41

0 references

Jeffrey L. Bennetzen

58

Jeffrey L Bennetzen

1 reference

21 June 2017

21

Caiyun Gou

1 reference

21 June 2017

Jun Wu

1

1 reference

21 June 2017

Zhiwen Wang

2

1 reference

21 June 2017

Zebin Shi

3

1 reference

21 June 2017

Shu Zhang

4

1 reference

21 June 2017

Ray Ming

5

1 reference

21 June 2017

Shilin Zhu

6

1 reference

21 June 2017

M Awais Khan

7

1 reference

21 June 2017

Shutian Tao

8

1 reference

21 June 2017

Schuyler S Korban

9

1 reference

21 June 2017

Nancy J Chen

11

1 reference

21 June 2017

Takeshi Nishio

12

1 reference

21 June 2017

Xun Xu

13

1 reference

21 June 2017

Lin Cong

14

1 reference

21 June 2017

Kaijie Qi

15

1 reference

21 June 2017

Xiaosan Huang

16

1 reference

21 June 2017

Yingtao Wang

17

1 reference

21 June 2017

Xiang Zhao

18

1 reference

21 June 2017

Juyou Wu

19

1 reference

21 June 2017

Weili Zhou

22

1 reference

21 June 2017

Hao Yin

23

1 reference

21 June 2017

Gaihua Qin

24

1 reference

21 June 2017

Yuhui Sha

25

1 reference

21 June 2017

Ye Tao

26

1 reference

21 June 2017

Hui Chen

27

1 reference

21 June 2017

Yanan Yang

28

1 reference

21 June 2017

Yue Song

29

1 reference

21 June 2017

Dongliang Zhan

30

1 reference

21 June 2017

Juan Wang

31

1 reference

21 June 2017

Meisong Dai

33

1 reference

21 June 2017

Chao Gu

34

1 reference

21 June 2017

Yuezhi Wang

35

1 reference

21 June 2017

Daihu Shi

36

1 reference

21 June 2017

Xiaowei Wang

37

1 reference

21 June 2017

Huping Zhang

38

1 reference

21 June 2017

Liang Zeng

39

1 reference

21 June 2017

Danman Zheng

40

1 reference

21 June 2017

Maoshan Chen

42

1 reference

21 June 2017

Guangbiao Wang

43

1 reference

21 June 2017

Lin Xie

44

1 reference

21 June 2017

Valpuri Sovero

45

1 reference

21 June 2017

Shoufeng Sha

46

1 reference

21 June 2017

Wenjiang Huang

47

1 reference

21 June 2017

Shujun Zhang

48

1 reference

21 June 2017

Mingyue Zhang

49

1 reference

21 June 2017

Jiangmei Sun

50

1 reference

21 June 2017

Linlin Xu

51

1 reference

21 June 2017

Yuan Li

52

1 reference

21 June 2017

Xing Liu

53

1 reference

21 June 2017

Qingsong Li

54

1 reference

21 June 2017

Jiahui Shen

55

1 reference

21 June 2017

Robert E Paull

57

1 reference

21 June 2017

Shaoling Zhang

60

1 reference

21 June 2017

language of work or name

English

0 references

publication date

13 November 2012

1 reference

21 June 2017

1 reference

21 June 2017

23

1 reference

21 June 2017

2

1 reference

21 June 2017

396-408

1 reference

Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers

21 June 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera)

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

The genome of woodland strawberry (Fragaria vesca)

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

The genome of the domesticated apple (Malus × domestica Borkh.)

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

The genome of the cucumber, Cucumis sativus L

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Fast and accurate short read alignment with Burrows-Wheeler transform

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Plants with double genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

PAML 4: phylogenetic analysis by maximum likelihood

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Rfam: annotating non-coding RNAs in complete genomes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

17 March 2017

GeneWise and Genomewise

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

MUSCLE: multiple sequence alignment with high accuracy and high throughput

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

BLAT—The BLAST-Like Alignment Tool

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Tandem repeats finder: a program to analyze DNA sequences

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Basic local alignment search tool

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Circos: an information aesthetic for comparative genomics

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Repbase Update, a database of eukaryotic repetitive elements

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Open source clustering software

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Scaffolding pre-assembled contigs using SSPACE

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

CAFE: a computational tool for the study of gene family evolution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

The map-based sequence of the rice genome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Reference genome sequence of the model plant Setaria

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Stacks: building and genotyping Loci de novo from short-read sequences

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Construction and application for QTL analysis of a Restriction Site Associated DNA (RAD) linkage map in barley

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Distribution, diversity, evolution, and survival of Helitrons in the maize genome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

PRGdb: a bioinformatics platform for plant resistance gene analysis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

MGEScan-non-LTR: computational identification and classification of autonomous non-LTR retrotransposons in eukaryotic genomes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Creating a honey bee consensus gene set

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

AUGUSTUS: ab initio prediction of alternative transcripts

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Comparison of the genome structure of the self-incompatibility (S) locus in interspecific pairs of S haplotypes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Fossil evidence and phylogeny: the age of major angiosperm clades based on mesofossil and macrofossil evidence from Cretaceous deposits

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Assemblies: the good, the bad, the ugly.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Metabolic adaptation after whole genome duplication.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Biosynthesis of plant-derived flavor compounds.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Synteny and Collinearity in Plant Genomes

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

SND1, a NAC domain transcription factor, is a key regulator of secondary wall synthesis in fibers of Arabidopsis.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Paircoil2: improved prediction of coiled coils from sequence.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Silencing of hydroxycinnamoyl-coenzyme A shikimate/quinate hydroxycinnamoyltransferase affects phenylpropanoid biosynthesis

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Structural and transcriptional analysis of the self-incompatibility locus of almond: identification of a pollen-expressed F-box gene with haplotype-specific polymorphism.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

LTR_STRUC: a novel search and identification program for LTR retrotransposons

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

Functional analysis of tobacco LIM protein Ntlim1 involved in lignin biosynthesis.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3561880

27 November 2018

Identifiers

DOI

10.1101/GR.144311.112

1 reference

OpenCitations bibliographic resource ID

21 June 2017

485166

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference