(Q28732830)

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A temporal-omic study of Propionibacterium freudenreichii CIRM-BIA1 adaptation strategies in conditions mimicking cheese ripening in the cold

scientific article (publication date: 2012)

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scholarly article

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A temporal-omic study of Propionibacterium freudenreichii CIRM-BIA1 adaptation strategies in conditions mimicking cheese ripening in the cold (English)

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Propionibacterium freudenreichii

object named as

Propionibacterium freudenreichii

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based on heuristic

Stéphanie-Marie Deutsch

5

object named as

Stéphanie-Marie Deutsch

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Marion Dalmasso

object named as

Marion Dalmasso

1

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object named as

Julien Jardin

9

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author name string

Julie Aubert

2

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Valérie Briard-Bion

3

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Victoria Chuat

4

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Stéphanie-Marie Deutsch

5

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Sergine Even

6

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Hélène Falentin

7

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Gwénaël Jan

8

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Marie-Bernadette Maillard

10

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Sandrine Parayre

11

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Michel Piot

12

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Jarna Tanskanen

13

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Anne Thierry

14

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language of work or name

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publication date

2012

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7

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1

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e29083

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copyright license

Creative Commons Attribution 4.0 International

13 January 2012

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April 2022 Public Data File from Crossref

copyright status

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describes a project that uses

object named as

limma

2 references

Europe PubMed Central

22 June 2022

https://europepmc.org/article/PMC/3258244

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

The complete genome of Propionibacterium freudenreichii CIRM-BIA1, a hardy actinobacterium with food and probiotic applications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

17 March 2017

The RIN: an RNA integrity number for assigning integrity values to RNA measurements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

17 March 2017

Quadratic regression analysis for gene discovery and pattern recognition for non-cyclic short time-course microarray experiments

1 reference

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17 March 2017

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

1 reference

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17 March 2017

Primer3Plus, an enhanced web interface to Primer3

1 reference

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19 March 2017

Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein

1 reference

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7 April 2017

New insights into physiology and metabolism of Propionibacterium freudenreichii

1 reference

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3 June 2018

Life in the cold: a proteomic study of cold-repressed proteins in the antarctic bacterium pseudoalteromonas haloplanktis TAC125

1 reference

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Staphylococcus aureus seroproteomes discriminate ruminant isolates causing mild or severe mastitis

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3 June 2018

Dynamic analysis of the Lactococcus lactis transcriptome in cheeses made from milk concentrated by ultrafiltration reveals multiple strategies of adaptation to stresses

1 reference

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1 reference

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1 reference

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3 June 2018

Correlation of the capsular phenotype in Propionibacterium freudenreichii with the level of expression of gtf, a unique polysaccharide synthase-encoding gene.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

3 June 2018

Genome-wide screening of genes whose enhanced expression affects glycogen accumulation in Escherichia coli.

1 reference

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How do bacteria sense and respond to low temperature?

1 reference

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3 June 2018

A toolbox for validation of mass spectrometry peptides identification and generation of database: IRMa

1 reference

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3 June 2018

Physiology and genetics of Listeria monocytogenes survival and growth at cold temperatures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

3 June 2018

Role of polyphosphates in microbial adaptation to extreme environments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

3 June 2018

A genomic search approach to identify esterases in Propionibacterium freudenreichii involved in the formation of flavour in Emmental cheese

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

3 June 2018

Coping with our cold planet

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

3 June 2018

Carbohydrate starvation causes a metabolically active but nonculturable state in Lactococcus lactis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

3 June 2018

Metabolism of Aspartate by Propionibacterium freudenreichii subsp. shermanii: Effect on Lactate Fermentation.

1 reference

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3 June 2018

Utilization of Lactate Isomers by Propionibacterium freudenreichii subsp. shermanii: Regulatory Role for Intracellular Pyruvate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

3 June 2018

ADP-glucose pyrophosphorylase, a regulatory enzyme for bacterial glycogen synthesis

1 reference

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3 June 2018

Conversion of L-leucine to isovaleric acid by Propionibacterium freudenreichii TL 34 and ITGP23.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

3 June 2018

Changes in protein synthesis and morphology during acid adaptation of Propionibacterium freudenreichii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

3 June 2018

Cold shock and adaptation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

3 June 2018

Isolation of intact chains of polyphosphate from "Propionibacterium shermanii" grown on glucose or lactate

1 reference

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3 June 2018

Specific metabolic activity of ripening bacteria quantified by real-time reverse transcription PCR throughout Emmental cheese manufacture

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029083

21 January 2018

Comparative transcriptome analysis of Lactococcus lactis subsp. cremoris strains under conditions simulating Cheddar cheese manufacture.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029083

21 January 2018

An evaluation of the taxonomy of Propionibacterium

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029083

21 January 2018

Screening of genes regulated by cold shock in Shewanella piezotolerans WP3 and time course expression of cold-regulated genes

1 reference

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21 January 2018

Production of branched-chain aroma compounds by Propionibacterium freudenreichii: links with the biosynthesis of membrane fatty acids.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029083

21 January 2018

Concurrent transcriptional activation of ppa and ppx genes by phosphate deprivation in the cyanobacterium Synechocystis sp. strain PCC 6803.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029083

21 January 2018

In Vivo13C NMR Study of the Bidirectional Reactions of the Wood–Werkman Cycle and around the Pyruvate Node in Propionibacterium freudenreichii subsp. shermanii and Propionibacterium acidipropionici

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029083

21 January 2018

Mass spectrometry proteomic analysis of stress adaptation reveals both common and distinct response pathways in Propionibacterium freudenreichii

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029083

21 January 2018

Changes in protein synthesis during thermal adaptation of Propionibacterium freudenreichii subsp. shermanii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258244

27 November 2018

Identifiers

10.1371/JOURNAL.PONE.0029083

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2012PLoSO...729083D

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release_z7dlxfht55ghrdhlmnns6yfiri

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https://api.fatcat.wiki/v0/release/z7dlxfht55ghrdhlmnns6yfiri

24 November 2022

based on heuristic

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