(Q28740773)

14 December 2023

1

Woo Jun Sul

Woo Jun

Sul

1 reference

14 December 2023

James R Cole

2

James R

Cole

1 reference

14 December 2023

Ederson da C Jesus

3

Ederson da C

Jesus

1 reference

14 December 2023

Qiong Wang

4

Qiong

Wang

1 reference

14 December 2023

Ryan J Farris

5

Ryan J

Farris

1 reference

14 December 2023

Jordan A Fish

6

Jordan A

Fish

1 reference

Proceedings of the National Academy of Sciences of the United States of America

14 December 2023

language of work or name

English

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publication date

30 August 2011

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published in

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volume

108

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issue

35

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page(s)

14637-42

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cites work

Infernal 1.0: inference of RNA alignments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Pyrosequencing enumerates and contrasts soil microbial diversity

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Microbial diversity in the deep sea and the underexplored "rare biosphere"

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

UniFrac: a new phylogenetic method for comparing microbial communities

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

The detection of disease clustering and a generalized regression approach

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

FastTree: computing large minimum evolution trees with profiles instead of a distance matrix

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Generation of multimillion-sequence 16S rRNA gene libraries from complex microbial communities by assembling paired-end illumina reads

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Comprehensive census of bacteria in clean rooms by using DNA microarray and cloning methods

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Comparative analysis of pyrosequencing and a phylogenetic microarray for exploring microbial community structures in the human distal intestine

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Accurate determination of microbial diversity from 454 pyrosequencing data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Microbial community profiling for human microbiome projects: Tools, techniques, and challenges

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

A renaissance for the pioneering 16S rRNA gene

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Novelty and uniqueness patterns of rare members of the soil biosphere

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Habitat-Lite: a GSC case study based on free text terms for environmental metadata

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Microbial population structures in the deep marine biosphere

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Short pyrosequencing reads suffice for accurate microbial community analysis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Abundance-based similarity indices and their estimation when there are unseen species in samples

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

Polyphasic Taxonomy of the Genus Vibrio: Numerical Taxonomy of Vibrio cholerae, Vibrio parahaemolyticus , and Related Vibrio Species

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167511

How well do multivariate data sets match? The advantages of a Procrustean superimposition approach over the Mantel test

3 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1111435108

Metagenome of a versatile chemolithoautotroph from expanding oceanic dead zones

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1111435108

The 'rare biosphere': a reality check

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1111435108

21 January 2018

Identifiers

DOI

10.1073/PNAS.1111435108

1 reference

ADS bibcode

2011PNAS..10814637S

0 references

1 reference

1 reference

1 reference