(Q28741397)

22 June 2017

title

Evolution combined with genomic study elucidates genetic bases of isobutanol tolerance in Escherichia coli (English)

1 reference

22 June 2017

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11

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Erdogan Gulari

13

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author name string

Jeremy J Minty

1

1 reference

22 June 2017

Ann A Lesnefsky

2

1 reference

22 June 2017

Fengming Lin

3

1 reference

22 June 2017

Yu Chen

4

1 reference

22 June 2017

Ted A Zaroff

5

1 reference

22 June 2017

Artur B Veloso

6

1 reference

22 June 2017

Bin Xie

7

1 reference

22 June 2017

Catie A McConnell

8

1 reference

22 June 2017

Rebecca J Ward

9

1 reference

22 June 2017

Donald R Schwartz

10

1 reference

22 June 2017

Yuan Gao

12

1 reference

22 June 2017

Xiaoxia Nina Lin

14

1 reference

22 June 2017

Jean-Marie Rouillard

11

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22 June 2017

Erdogan Gulari

13

1 reference

22 June 2017

language of work or name

English

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publication date

25 March 2011

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22 June 2017

published in

Microbial Cell Factories

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22 June 2017

volume

10

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22 June 2017

issue

1

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page(s)

18

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A Mechanistic Model of PCR for Accurate Quantification of Quantitative PCR Data

22 June 2017

cites work

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17 March 2017

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17 March 2017

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17 March 2017

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17 March 2017

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17 March 2017

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17 March 2017

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17 March 2017

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17 March 2017

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17 March 2017

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Structural Basis for Signal-Sequence Recognition by the Translocase Motor SecA as Determined by NMR

17 March 2017

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17 March 2017

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17 March 2017

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17 March 2017

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17 March 2017

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17 March 2017

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17 March 2017

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17 March 2017

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7 April 2017

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7 April 2017

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Variance stabilization applied to microarray data calibration and to the quantification of differential expression

7 April 2017

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Evolutionary rate in the protein interaction network

7 April 2017

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NAD-dependent malate dehydrogenase protects against oxidative damage in Escherichia coli K-12 through the action of oxaloacetate

7 April 2017

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Evolution, genomic analysis, and reconstruction of isobutanol tolerance in Escherichia coli

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3071312

Divergence involving global regulatory gene mutations in an Escherichia coli population evolving under phosphate limitation

3 June 2018

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Genomic identification of a novel mutation in hfq that provides multiple benefits in evolving glucose-limited populations of Escherichia coli.

3 June 2018

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Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli.

3 June 2018

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Adaptive evolution of Escherichia coli K-12 MG1655 during growth on a Nonnative carbon source, L-1,2-propanediol

3 June 2018

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A comparative view of metabolite and substrate stress and tolerance in microbial bioprocessing: From biofuels and chemicals, to biocatalysis and bioremediation

3 June 2018

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Increasing unsaturated fatty acid contents in Escherichia coli by coexpression of three different genes

3 June 2018

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Functional genomic study of exogenous n-butanol stress in Escherichia coli

3 June 2018

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Prevalent positive epistasis in Escherichia coli and Saccharomyces cerevisiae metabolic networks

3 June 2018

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A genomic-library based discovery of a novel, possibly synthetic, acid-tolerance mechanism in Clostridium acetobutylicum involving non-coding RNAs and ribosomal RNA processing

3 June 2018

1 reference

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Achievements and perspectives to overcome the poor solvent resistance in acetone and butanol-producing microorganisms

3 June 2018

1 reference

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A PhoQ/P-regulated small RNA regulates sensitivity of Escherichia coli to antimicrobial peptides

3 June 2018

1 reference

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Whole-genome resequencing of Escherichia coli K-12 MG1655 undergoing short-term laboratory evolution in lactate minimal media reveals flexible selection of adaptive mutations

3 June 2018

1 reference

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Automated design of synthetic ribosome binding sites to control protein expression

3 June 2018

1 reference

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3 June 2018

1 reference

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An integrated network approach identifies the isobutanol response network of Escherichia coli

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3071312

Directed evolution of ionizing radiation resistance in Escherichia coli

3 June 2018

1 reference

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Microbial production of advanced transportation fuels in non-natural hosts

3 June 2018

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3 June 2018

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Evolutionary rates and centrality in the yeast gene regulatory network

3 June 2018

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3 June 2018

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3 June 2018

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3 June 2018

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Demonstration of intrinsic efflux activity of Escherichia coli K-12 AG100 by an automated ethidium bromide method

3 June 2018

1 reference

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3 June 2018

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3 June 2018

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3 June 2018

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3 June 2018

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Stimulus-dependent differential regulation in the Escherichia coli PhoQ PhoP system

3 June 2018

1 reference

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Evolution of global regulatory networks during a long-term experiment with Escherichia coli

3 June 2018

1 reference

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3 June 2018

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Involvement of the YneS/YgiH and PlsX proteins in phospholipid biosynthesis in both Bacillus subtilis and Escherichia coli

3 June 2018

1 reference

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From microbial differentiation to ribosome engineering

3 June 2018

1 reference

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3 June 2018

1 reference

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Dynamics of genomic-library enrichment and identification of solvent tolerance genes for Clostridium acetobutylicum

3 June 2018

1 reference

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Membrane composition changes and physiological adaptation by Streptococcus mutans signal recognition particle pathway mutants

3 June 2018

1 reference

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Modulating the outer membrane with small RNAs

3 June 2018

1 reference

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Transcriptome network component analysis with limited microarray data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3071312

Methodological study of affine transformations of gene expression data with proposed robust non-parametric multi-dimensional normalization method

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3071312

Quorum sensing and multidrug transporters in Escherichia coli

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3071312

CsdA, a cold-shock RNA helicase from Escherichia coli, is involved in the biogenesis of 50S ribosomal subunit

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3071312

Network component analysis: reconstruction of regulatory signals in biological systems

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3071312

OligoArray 2.0: design of oligonucleotide probes for DNA microarrays using a thermodynamic approach

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3071312

Expression stability of six housekeeping genes: A proposal for resistance gene quantification studies of Pseudomonas aeruginosa by real-time quantitative RT-PCR.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3071312

rpoS mutations and loss of general stress resistance in Escherichia coli populations as a consequence of conflict between competing stress responses

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3071312

Cell surface properties of organic solvent-tolerant mutants of Escherichia coli K-12.

3 June 2018

1 reference

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Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3071312

Challenges in engineering microbes for biofuels production.

3 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F1475-2859-10-18

Global transcription machinery engineering: a new approach for improving cellular phenotype.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1475-2859-10-18

Comparative genome sequencing of Escherichia coli allows observation of bacterial evolution on a laboratory timescale

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1475-2859-10-18

Construction of an Escherichia coli K-12 mutant for homoethanologenic fermentation of glucose or xylose without foreign genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1475-2859-10-18

1-Alkanols and membranes: a story of attraction

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1475-2859-10-18

Control of RpoS in global gene expression of Escherichia coli in minimal media.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1475-2859-10-18

Distributions of epistasis in microbes fit predictions from a fitness landscape model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1475-2859-10-18

Impact of the RNA chaperone Hfq on multidrug resistance in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1475-2859-10-18

Impacts of yeast metabolic network structure on enzyme evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1475-2859-10-18

Defining the role of the Escherichia coli chaperone SecB using comparative proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1475-2859-10-18

Gene array-based identification of changes that contribute to ethanol tolerance in ethanologenic Escherichia coli: comparison of KO11 (parent) to LY01 (resistant mutant).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1475-2859-10-18

HrpA, a DEAH-box RNA helicase, is involved in mRNA processing of a fimbrial operon in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1475-2859-10-18

Using the KEGG database resource

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21435272

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The importance of engineering physiological functionality into microbes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21435272

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1475-2859-10-18

1 reference

Dimensions Publication ID

22 June 2017

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1475-2859-10-18

OpenCitations bibliographic resource ID

2998551

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2998551

1 reference