(Q28743250)

Gordon Lemmon

10

0 references

Justin Ashworth

Justin Ashworth

7

0 references

Jacob E Corn

Jacob E Corn

3

0 references

Sarel J Fleishman

Sarel J Fleishman

1

0 references

Jens Meiler

Jens Meiler

11

0 references

David Baker

David Baker

12

0 references

Andrew Leaver-Fay

2

Andrew Leaver-Fay

0 references

author name string

Eva-Maria Strauch

4

0 references

Sagar D Khare

5

0 references

Paul Murphy

8

0 references

Florian Richter

Creative Commons Attribution 4.0 International

9

0 references

language of work or name

English

0 references

publication date

2011

0 references

published in

PLOS One

0 references

volume

6

0 references

issue

6

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page(s)

e20161

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copyright license

start time

24 June 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Computational Design of Proteins Targeting the Conserved Stem Region of Influenza Hemagglutinin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Computational reprogramming of homing endonuclease specificity at multiple adjacent base pairs

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Sub-angstrom accuracy in protein loop reconstruction by robotics-inspired conformational sampling

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Kemp elimination catalysts by computational enzyme design

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

De novo computational design of retro-aldol enzymes

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Computational redesign of endonuclease DNA binding and cleavage specificity

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Design of a Novel Globular Protein Fold with Atomic-Level Accuracy

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Native protein sequences are close to optimal for their structures

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

The interpretation of protein structures: Estimation of static accessibility

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Backrub-like backbone simulation recapitulates natural protein conformational variability and improves mutant side-chain prediction

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Macromolecular modeling with rosetta

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Alternate states of proteins revealed by detailed energy landscape mapping

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Engineering a protein-protein interface using a computationally designed library

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

PyRosetta: a script-based interface for implementing molecular modeling algorithms using Rosetta

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Exploitation of binding energy for catalysis and design

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Motif-directed flexible backbone design of functional interactions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

RosettaHoles: rapid assessment of protein core packing for structure prediction, refinement, design, and validation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

New algorithms and an in silico benchmark for computational enzyme design

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Manufacturing immunity to disease in a test tube: the magic bullet realized

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

The backrub motion: how protein backbone shrugs when a sidechain dances

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Computational thermostabilization of an enzyme

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

An adaptive dynamic programming algorithm for the side chain placement problem.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Cyclic coordinate descent: A robotics algorithm for protein loop closure.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Influence of interior packing and hydrophobicity on the stability of a protein.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123292

Computational redesign of protein-protein interaction specificity

3 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020161

ROSETTALIGAND: protein-small molecule docking with full side-chain flexibility.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020161

RosettaLigand docking with full ligand and receptor flexibility.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020161

A simple physical model for the prediction and design of protein-DNA interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020161

10.1371/JOURNAL.PONE.0020161

21 January 2018

Identifiers

DOI

1 reference

ADS bibcode

2011PLoSO...620161F

0 references

1 reference

1 reference

PubMed publication ID

21731610

1 reference