(Q29048164)

5

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Anna Tramontano

4

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Bohdan Monastyrskyy

1

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Krzysztof Fidelis

2

object named as

Krzysztof Fidelis

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author name string

John Moult

Improved sequence-based prediction of disordered regions with multilayer fusion of multiple information sources

3

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language of work or name

English

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publication date

2011

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published in

Proteins

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volume

79 Suppl 10

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issue

S10

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page(s)

107-18

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Predicting continuous local structure and the effect of its substitution for secondary structure in fragment-free protein structure prediction

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Improved disorder prediction by combination of orthogonal approaches

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Function and structure of inherently disordered proteins

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

OnD-CRF: predicting order and disorder in proteins using [corrected] conditional random fields

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Detailed estimation of bioinformatics prediction reliability through the Fragmented Prediction Performance Plots

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

DisProt: the Database of Disordered Proteins

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

A practical overview of protein disorder prediction methods

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Overlapping confidence intervals or standard error intervals: what do they mean in terms of statistical significance?

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Intrinsically unstructured proteins and their functions

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

LGA: A method for finding 3D similarities in protein structures

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Principles that govern the folding of protein chains

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content

6 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

GlobPlot: Exploring protein sequences for globularity and disorder

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Intrinsically unstructured proteins

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Assessing the accuracy of prediction algorithms for classification: an overview

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Comparing the areas under two or more correlated receiver operating characteristic curves: a nonparametric approach

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Comparison of the predicted and observed secondary structure of T4 phage lysozyme

7 April 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

7 April 2017

https://api.crossref.org/works/10.1002%2FPROT.23161

CASP9 target classification

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Library of disordered patterns in 3D protein structures.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Fluctuations of backbone torsion angles obtained from NMR-determined structures and their prediction

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Archaic chaos: intrinsically disordered proteins in Archaea

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

PONDR-FIT: a meta-predictor of intrinsically disordered amino acids

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

svmPRAT: SVM-based protein residue annotation toolkit

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

PreDisorder: ab initio sequence-based prediction of protein disordered regions.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Bioinformatical approaches to characterize intrinsically disordered/unstructured proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Predicting intrinsic disorder in proteins: an overview

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Unfoldomics of human diseases: linking protein intrinsic disorder with diseases

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

The role of intrinsically unstructured proteins in neurodegenerative diseases

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Linking folding and binding

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Large-scale prediction of long disordered regions in proteins using random forests

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Malleable machines take shape in eukaryotic transcriptional regulation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

The unfoldomics decade: an update on intrinsically disordered proteins.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Mining alpha-helix-forming molecular recognition features with cross species sequence alignments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Assessment of disorder predictions in CASP7.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

PrDOS: prediction of disordered protein regions from amino acid sequence

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Functional anthology of intrinsic disorder. 3. Ligands, post-translational modifications, and diseases associated with intrinsically disordered proteins.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Predicting mostly disordered proteins by using structure-unknown protein data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Intrinsic disorder and functional proteomics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Spritz: a server for the prediction of intrinsically disordered regions in protein sequences using kernel machines.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Length-dependent prediction of protein intrinsic disorder.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Critical assessment of methods of protein structure prediction (CASP)-round V.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Bootstrap confidence intervals: when, which, what? A practical guide for medical statisticians

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3212657

Characterization of segments from the central region of BRCA1: an intrinsically disordered scaffold for multiple protein-protein and protein-DNA interactions?

3 June 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.23161

Combining prediction, computation and experiment for the characterization of protein disorder.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.23161

Assessment of disorder predictions in CASP6.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.23161

Rational drug design via intrinsically disordered protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.23161

Protein flexibility and intrinsic disorder

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.23161

CASP9 results compared to those of previous CASP experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.23161

POODLE-L: a two-level SVM prediction system for reliably predicting long disordered regions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.23161

Evaluation of disorder predictions in CASP5

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.23161

Assessment of disorder predictions in CASP8

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.23161

21 January 2018

FOUNDATION OF EVALUATION

1 reference

https://api.crossref.org/works/10.1002%2FPROT.23161

POODLE-I: disordered region prediction by integrating POODLE series and structural information predictors based on a workflow approach

21 January 2018

1 reference

12 December 2020

Intrinsic protein disorder in complete genomes

1 reference

12 December 2020

Trend of amino acid composition of proteins of different taxa

1 reference

12 December 2020

POODLE-S: web application for predicting protein disorder by using physicochemical features and reduced amino acid set of a position-specific scoring matrix

1 reference

12 December 2020

Intrinsic disorder prediction from the analysis of multiple protein fold recognition models

1 reference

12 December 2020

Identifiers

DOI

10.1002/PROT.23161

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2110753

OpenCitations bibliographic resource ID

2110753

1 reference