(Q30372152)

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Discrete and structurally unique proteins (tāpirins) mediate attachment of extremely thermophilic Caldicellulosiruptor species to cellulose.

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Europe PubMed Central

PMC publication ID

15 September 2017

Discrete and structurally unique proteins (tāpirins) mediate attachment of extremely thermophilic Caldicellulosiruptor species to cellulose. (English)

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Europe PubMed Central

PMC publication ID

15 September 2017

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Robert L Hettich

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Europe PubMed Central

PMC publication ID

15 September 2017

Markus Alahuhta

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Markus Alahuhta

2

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Sara E Blumer-Schuette

object named as

Sara E Blumer-Schuette

1

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Michael E. Himmel

9

object named as

Michael E Himmel

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Europe PubMed Central

15 September 2017

PMC publication ID

author name string

Jonathan M Conway

3

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Europe PubMed Central

PMC publication ID

15 September 2017

Laura L Lee

4

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Europe PubMed Central

PMC publication ID

15 September 2017

Jeffrey V Zurawski

5

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

Richard J Giannone

6

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

Vladimir V Lunin

8

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Europe PubMed Central

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15 September 2017

Robert M Kelly

10

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Europe PubMed Central

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15 September 2017

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publication date

26 February 2015

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Europe PubMed Central

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15 September 2017

Journal of Biological Chemistry

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Europe PubMed Central

PMC publication ID

15 September 2017

290

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Europe PubMed Central

PMC publication ID

15 September 2017

17

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

10645-10656

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

The InterPro protein families database: the classification resource after 15 years

1 reference

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Deletion of Caldicellulosiruptor bescii CelA reveals its crucial role in the deconstruction of lignocellulosic biomass

1 reference

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A new family of β-helix proteins with similarities to the polysaccharide lyases

1 reference

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4 June 2018

Extracellular secretion of noncatalytic plant cell wall-binding proteins by the cellulolytic thermophile Caldicellulosiruptor bescii

1 reference

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Structure- and context-based analysis of the GxGYxYP family reveals a new putative class of glycoside hydrolase

1 reference

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Revealing nature's cellulase diversity: the digestion mechanism of Caldicellulosiruptor bescii CelA

1 reference

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4 June 2018

Automatic protein structure solution from weak X-ray data.

1 reference

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MEGA6: Molecular Evolutionary Genetics Analysis version 6.0

1 reference

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4 June 2018

Thermophilic lignocellulose deconstruction

1 reference

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Expression of cellulosome components and type IV pili within the extracellular proteome of Ruminococcus flavefaciens 007.

1 reference

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4 June 2018

Structural basis for entropy-driven cellulose binding by a type-A cellulose-binding module (CBM) and bacterial expansin

1 reference

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4 June 2018

Self-surface assembly of cellulosomes with two miniscaffoldins on Saccharomyces cerevisiae for cellulosic ethanol production

1 reference

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4 June 2018

Caldicellulosiruptor core and pangenomes reveal determinants for noncellulosomal thermophilic deconstruction of plant biomass

1 reference

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4 June 2018

S-layer homology domain proteins Csac_0678 and Csac_2722 are implicated in plant polysaccharide deconstruction by the extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus

1 reference

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Spatial and temporal dynamics of cellulose degradation and biofilm formation by Caldicellulosiruptor obsidiansis and Clostridium thermocellum

1 reference

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SignalP 4.0: discriminating signal peptides from transmembrane regions

1 reference

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How recombinant swollenin from Kluyveromyces lactis affects cellulosic substrates and accelerates their hydrolysis

1 reference

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4 June 2018

The complete genome sequence of Fibrobacter succinogenes S85 reveals a cellulolytic and metabolic specialist

1 reference

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4 June 2018

Highly stable binding proteins derived from the hyperthermophilic Sso7d scaffold.

1 reference

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4 June 2018

REFMAC5 for the refinement of macromolecular crystal structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

4 June 2018

Overview of the CCP4 suite and current developments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

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Metagenomic discovery of biomass-degrading genes and genomes from cow rumen

1 reference

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4 June 2018

Insights into plant biomass conversion from the genome of the anaerobic thermophilic bacterium Caldicellulosiruptor bescii DSM 6725

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

4 June 2018

Phylogenetic, microbiological, and glycoside hydrolase diversities within the extremely thermophilic, plant biomass-degrading genus Caldicellulosiruptor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

4 June 2018

A hierarchical classification of polysaccharide lyases for glycogenomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

4 June 2018

Surface Display of a Functional Minicellulosome by Intracellular Complementation Using a Synthetic Yeast Consortium and Its Application to Cellulose Hydrolysis and Ethanol Production

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

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Mining metagenomic data for novel domains: BACON, a new carbohydrate-binding module

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

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Features and development of Coot

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MolProbity: all-atom structure validation for macromolecular crystallography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

4 June 2018

Yeast surface display of trifunctional minicellulosomes for simultaneous saccharification and fermentation of cellulose to ethanol

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

4 June 2018

BLAST+: architecture and applications

1 reference

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4 June 2018

Carbohydrate utilization patterns for the extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus reveal broad growth substrate preferences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

4 June 2018

Phasercrystallographic software

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

4 June 2018

In situ proteolysis to generate crystals for structure determination: an update

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

4 June 2018

Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

1 reference

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4 June 2018

Cell surface enzyme attachment is mediated by family 37 carbohydrate-binding modules, unique to Ruminococcus albus

1 reference

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1 reference

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1 reference

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1 reference

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In situ proteolysis for protein crystallization and structure determination

1 reference

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1 reference

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Outer membrane proteins of Fibrobacter succinogenes with potential roles in adhesion to cellulose and in cellulose digestion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

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Reclassification of Thermoanaerobium acetigenum as Caldicellulosiruptor acetigenus comb. nov. and emendation of the genus description.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

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1 reference

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Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

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1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

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1 reference

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

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Substructure search procedures for macromolecular structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

4 June 2018

Multidomain and multifunctional glycosyl hydrolases from the extreme thermophile Caldicellulosiruptor isolate Tok7B.1.

1 reference

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4 June 2018

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1 reference

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Yeast surface display for screening combinatorial polypeptide libraries

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1 reference

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celA, another gene coding for a multidomain cellulase from the extreme thermophile Caldocellum saccharolyticum

1 reference

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1 reference

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1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409232

20 June 2018

The Ruminococcus albus pilA1-pilA2 locus: expression and putative role of two adjacent pil genes in pilus formation and bacterial adhesion to cellulose.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M115.641480

21 January 2018

Protocols for production of selenomethionine-labeled proteins in 2-L polyethylene terephthalate bottles using auto-induction medium

1 reference

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Simple algorithm for a maximum-likelihood SAD function.

1 reference

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21 January 2018

Accurate bond and angle parameters for X-ray protein structure refinement

1 reference

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21 January 2018

Glycoside hydrolase inventory drives plant polysaccharide deconstruction by the extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M115.641480

21 January 2018

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1 reference

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21 January 2018

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1 reference

https://api.crossref.org/works/10.1074%2FJBC.M115.641480

21 January 2018

Adhesion to cellulose of the Gram-positive bacterium Ruminococcus albus involves type IV pili

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M115.641480

21 January 2018

Characterization and affinity applications of cellulose-binding domains

1 reference

https://pubmed.ncbi.nlm.nih.gov/25720489

12 December 2020

based on heuristic

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Characterization of a spontaneous adhesion-defective mutant of Ruminococcus albus strain 20

1 reference

https://pubmed.ncbi.nlm.nih.gov/25720489

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of a double cellulose-binding domain. Synergistic high affinity binding to crystalline cellulose

1 reference

https://pubmed.ncbi.nlm.nih.gov/25720489

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The cellulose-binding domain of endoglucanase A (CenA) from Cellulomonas fimi: evidence for the involvement of tryptophan residues in binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/25720489

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cellulosic ethanol production by combination of cellulase-displaying yeast cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/25720489

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M115.641480

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

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