(Q30534703)

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Spatial stochastic modelling of the Hes1 gene regulatory network: intrinsic noise can explain heterogeneity in embryonic stem cell differentiation

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scholarly article

1 reference

Europe PubMed Central

15 August 2017

Spatial stochastic modelling of the Hes1 gene regulatory network: intrinsic noise can explain heterogeneity in embryonic stem cell differentiation (English)

1 reference

Europe PubMed Central

15 August 2017

1 reference

based on heuristic

inferred from title

stem cell differentiation

1 reference

based on heuristic

inferred from title

Andreas Hellander

object named as

Andreas Hellander

2

0 references

author name string

Marc Sturrock

1

1 reference

Europe PubMed Central

15 August 2017

Anastasios Matzavinos

3

1 reference

Europe PubMed Central

15 August 2017

Mark A J Chaplain

4

1 reference

Europe PubMed Central

15 August 2017

publication date

16 January 2013

1 reference

Europe PubMed Central

15 August 2017

Journal of the Royal Society Interface

1 reference

Europe PubMed Central

15 August 2017

10

1 reference

Europe PubMed Central

15 August 2017

80

1 reference

Europe PubMed Central

15 August 2017

20120988

1 reference

Europe PubMed Central

15 August 2017

Hes1 oscillations contribute to heterogeneous differentiation responses in embryonic stem cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

URDME: a modular framework for stochastic simulation of reaction-transport processes in complex geometries

1 reference

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Dancing on DNA: kinetic aspects of search processes on DNA

1 reference

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A spatio-temporal model of Notch signalling in the zebrafish segmentation clock: conditions for synchronised oscillatory dynamics

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20 June 2018

A model of yeast cell-cycle regulation based on multisite phosphorylation

1 reference

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20 June 2018

Hes1 regulates embryonic stem cell differentiation by suppressing Notch signaling

1 reference

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Spatio-temporal correlations can drastically change the response of a MAPK pathway

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Rapid and sustained nuclear-cytoplasmic ERK oscillations induced by epidermal growth factor

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20 June 2018

The cyclic gene Hes1 contributes to diverse differentiation responses of embryonic stem cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

Computational models of the Notch network elucidate mechanisms of context-dependent signaling

1 reference

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20 June 2018

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1 reference

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20 June 2018

Control of the reversibility of cellular quiescence by the transcriptional repressor HES1.

1 reference

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20 June 2018

The stochastic nature of biochemical networks

1 reference

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Oscillations in notch signaling regulate maintenance of neural progenitors

1 reference

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Spontaneous separation of bi-stable biochemical systems into spatial domains of opposite phases

1 reference

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20 June 2018

Oscillatory regulation of Hes1: Discrete stochastic delay modelling and simulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

Noise-induced Min phenotypes in E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

Oscillations and variability in the p53 system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

Transport of messenger RNA from the nucleus to the cytoplasm

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

Real-time imaging of the somite segmentation clock: revelation of unstable oscillators in the individual presomitic mesoderm cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

Oscillations in NF-kappaB signaling control the dynamics of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

Anomalous subdiffusion is a measure for cytoplasmic crowding in living cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

Single mRNA molecules demonstrate probabilistic movement in living mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

Oscillatory expression of the bHLH factor Hes1 regulated by a negative feedback loop

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

Anomalous diffusion of fluorescent probes inside living cell nuclei investigated by spatially-resolved fluorescence correlation spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

20 June 2018

Noise-based switches and amplifiers for gene expression

1 reference

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The Hill equation revisited: uses and misuses.

1 reference

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20 June 2018

Structure, chromosomal locus, and promoter analysis of the gene encoding the mouse helix-loop-helix factor HES-1. Negative autoregulation through the multiple N box elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3565746

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Stochastic modelling for quantitative description of heterogeneous biological systems.

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

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Pattern Formation inside Bacteria: Fluctuations due to the Low Copy Number of Proteins

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

21 January 2018

Diffusion of transcription factors can drastically enhance the noise in gene expression

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

21 January 2018

Oscillatory expression of Hes1, p53, and NF-kappaB driven by transcriptional time delays.

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

21 January 2018

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1 reference

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A general method for numerically simulating the stochastic time evolution of coupled chemical reactions

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

21 January 2018

Modeling the Hes1 oscillator.

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

21 January 2018

Modelling transcriptional feedback loops: the role of Gro/TLE1 in Hes1 oscillations.

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

21 January 2018

Spatio-temporal modelling of the Hes1 and p53-Mdm2 intracellular signalling pathways

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

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Influence of the nuclear membrane, active transport, and cell shape on the Hes1 and p53-Mdm2 pathways: insights from spatio-temporal modelling.

1 reference

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21 January 2018

Efficient Exact Stochastic Simulation of Chemical Systems with Many Species and Many Channels

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

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Developmental potential of mouse embryos reconstructed from metaphase embryonic stem cell nuclei.

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

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WAVOS: a MATLAB toolkit for wavelet analysis and visualization of oscillatory systems

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

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HES1 inhibits cycling of hematopoietic progenitor cells via DNA binding.

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

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1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0988

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1 reference

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26 November 2018

Identifiers

10.1098/RSIF.2012.0988

1 reference

Europe PubMed Central

15 August 2017

1 reference

Europe PubMed Central

15 August 2017

1 reference

Europe PubMed Central

15 August 2017

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