(Q30592724)

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Reconciling a Salmonella enterica metabolic model with experimental data confirms that overexpression of the glyoxylate shunt can rescue a lethal ppc deletion mutant

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24 February 2020

Reconciling a Salmonella enterica metabolic model with experimental data confirms that overexpression of the glyoxylate shunt can rescue a lethal ppc deletion mutant (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23432746%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Salmonella enterica

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Joshua A. Lerman

2

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24 February 2020

5

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24 February 2020

Bernhard Palsson

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Bernhard O Palsson

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24 February 2020

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Nicole L Fong

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24 February 2020

Irene Lam

3

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24 February 2020

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15 March 2013

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24 February 2020

FEMS Microbiology Letters

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24 February 2020

342

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24 February 2020

1

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24 February 2020

62-69

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24 February 2020

MIRAGE: a functional genomics-based approach for metabolic network model reconstruction and its application to cyanobacteria networks

1 reference

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Network context and selection in the evolution to enzyme specificity.

1 reference

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Reconstruction of the Saccharopolyspora erythraea genome-scale model and its use for enhancing erythromycin production

1 reference

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20 June 2018

In silico method for modelling metabolism and gene product expression at genome scale

1 reference

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Gap-filling analysis of the iJO1366 Escherichia coli metabolic network reconstruction for discovery of metabolic functions

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20 June 2018

Recent advances in reconstruction and applications of genome-scale metabolic models

1 reference

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A comprehensive genome-scale reconstruction of Escherichia coli metabolism--2011.

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Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0

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Haem oxygenase is synthetically lethal with the tumour suppressor fumarate hydratase

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Genome-scale reconstruction and in silico analysis of the Ralstonia eutropha H16 for polyhydroxyalkanoate synthesis, lithoautotrophic growth, and 2-methyl citric acid production

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A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2

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Drug Off-Target Effects Predicted Using Structural Analysis in the Context of a Metabolic Network Model

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Probabilistic integrative modeling of genome-scale metabolic and regulatory networks in Escherichia coli and Mycobacterium tuberculosis.

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20 June 2018

Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models

1 reference

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20 June 2018

Systematizing the generation of missing metabolic knowledge

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20 June 2018

The biomass objective function

1 reference

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BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions

1 reference

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Reconstruction of biochemical networks in microorganisms

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Computational prediction and experimental verification of the gene encoding the NAD+/NADP+-dependent succinate semialdehyde dehydrogenase in Escherichia coli.

1 reference

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20 June 2018

Glyoxylate and pyruvate are antagonistic effectors of the Escherichia coli IclR transcriptional regulator

1 reference

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Systems approach to refining genome annotation

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20 June 2018

Robust Salmonella metabolism limits possibilities for new antimicrobials.

1 reference

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20 June 2018

Control of isocitrate dehydrogenase catalytic activity by protein phosphorylation in Escherichia coli

1 reference

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20 June 2018

The activity reaction core and plasticity of metabolic networks

1 reference

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Metabolic engineering of Escherichia coli for enhanced production of succinic acid, based on genome comparison and in silico gene knockout simulation

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Relative expression of the products of glyoxylate bypass operon: contributions of transcription and translation

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A novel intercistronic regulatory element of prokaryotic operons

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Nucleotide sequence and expression of the aceK gene coding for isocitrate dehydrogenase kinase/phosphatase in Escherichia coli.

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Glyoxylate bypass operon of Escherichia coli: cloning and determination of the functional map.

1 reference

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26 November 2018

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10.1111/1574-6968.12109

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Europe PubMed Central

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24 February 2020

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24 February 2020

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24 February 2020

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