(Q30653360)

17 August 2017

LOcating non-unique matched tags (LONUT) to improve the detection of the enriched regions for ChIP-seq data (English)

1 reference

17 August 2017

10

1 reference

PubMed publication ID

25 June 2017

Rui Wang

1

1 reference

17 August 2017

Hang-Kai Hsu

2

1 reference

17 August 2017

Adam Blattler

3

1 reference

17 August 2017

Yisong Wang

4

1 reference

17 August 2017

Xun Lan

5

1 reference

17 August 2017

Yao Wang

6

1 reference

17 August 2017

Pei-Yin Hsu

7

1 reference

17 August 2017

Yu-Wei Leu

8

1 reference

17 August 2017

Tim H-M Huang

9

1 reference

17 August 2017

Victor X Jin

11

1 reference

17 August 2017

language of work or name

English

0 references

publication date

25 June 2013

1 reference

17 August 2017

1 reference

17 August 2017

8

1 reference

17 August 2017

6

1 reference

17 August 2017

e67788

1 reference

Creative Commons Attribution 4.0 International

17 August 2017

start time

25 June 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Cell type-specific binding patterns reveal that TCF7L2 can be tethered to the genome by association with GATA3.

20 June 2018

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Integration of Hi-C and ChIP-seq data reveals distinct types of chromatin linkages

20 June 2018

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20 June 2018

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ChIP-Seq data analysis: identification of protein-DNA binding sites with SISSRs peak-finder

20 June 2018

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20 June 2018

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Discovering transcription factor binding sites in highly repetitive regions of genomes with multi-read analysis of ChIP-Seq data

20 June 2018

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A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer.

20 June 2018

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ZNF274 recruits the histone methyltransferase SETDB1 to the 3' ends of ZNF genes

20 June 2018

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Inference of hierarchical regulatory network of estrogen-dependent breast cancer through ChIP-based data

20 June 2018

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W-ChIPeaks: a comprehensive web application tool for processing ChIP-chip and ChIP-seq data

20 June 2018

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Evaluation of algorithm performance in ChIP-seq peak detection

20 June 2018

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

20 June 2018

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Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

20 June 2018

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W-ChIPMotifs: a web application tool for de novo motif discovery from ChIP-based high-throughput data

20 June 2018

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ChIP-seq: advantages and challenges of a maturing technology

20 June 2018

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A clustering approach for identification of enriched domains from histone modification ChIP-Seq data

20 June 2018

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ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands

20 June 2018

1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

20 June 2018

1 reference

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Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

20 June 2018

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PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls

20 June 2018

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RNA-Seq: a revolutionary tool for transcriptomics

20 June 2018

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An integrated software system for analyzing ChIP-chip and ChIP-seq data

20 June 2018

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Model-based analysis of ChIP-Seq (MACS)

20 June 2018

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Modeling ChIP sequencing in silico with applications

20 June 2018

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Genome-wide identification of in vivo protein-DNA binding sites from ChIP-Seq data

20 June 2018

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FindPeaks 3.1: a tool for identifying areas of enrichment from massively parallel short-read sequencing technology

20 June 2018

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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

20 June 2018

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Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing

20 June 2018

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Genome-wide analysis of KAP1 binding suggests autoregulation of KRAB-ZNFs

20 June 2018

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Genome-wide mapping of in vivo protein-DNA interactions

20 June 2018

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High-resolution profiling of histone methylations in the human genome

20 June 2018

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Repbase Update, a database of eukaryotic repetitive elements

20 June 2018

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Whole-genome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells

20 June 2018

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Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.

21 January 2018

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PICS: probabilistic inference for ChIP-seq.

21 January 2018

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Investigating repetitively matching short sequencing reads: the enigmatic nature of H3K9me3.

21 January 2018

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10.1371/JOURNAL.PONE.0067788

21 January 2018

Identifiers

DOI

1 reference

17 August 2017

0 references

1 reference

17 August 2017

PubMed publication ID

23825685

1 reference