(Q30681790)

19 August 2017

dPeak: high resolution identification of transcription factor binding sites from PET and SET ChIP-Seq data (English)

1 reference

19 August 2017

6

0 references

Kevin Myers

object named as

Kevin Myers

3

0 references

Dongjun Chung

object named as

Dongjun Chung

1

0 references

author name string

Dan Park

2

1 reference

19 August 2017

Jeffrey Grass

4

1 reference

19 August 2017

Patricia Kiley

5

1 reference

19 August 2017

Sündüz Keleş

7

1 reference

19 August 2017

17 October 2013

1 reference

PLOS Computational Biology

19 August 2017

1 reference

19 August 2017

9

1 reference

19 August 2017

10

1 reference

19 August 2017

e1003246

1 reference

Creative Commons Attribution 4.0 International

19 August 2017

start time

17 October 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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Direct and indirect effects of H-NS and Fis on global gene expression control in Escherichia coli

28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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Evaluation of algorithm performance in ChIP-seq peak detection

28 July 2018

1 reference

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28 July 2018

1 reference

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A blind deconvolution approach to high-resolution mapping of transcription factor binding sites from ChIP-seq data

28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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Genome-wide B1 retrotransposon binds the transcription factors dioxin receptor and Slug and regulates gene expression in vivo

28 July 2018

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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

28 July 2018

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Genome-wide mapping of in vivo protein-DNA interactions

28 July 2018

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Alu elements contain many binding sites for transcription factors and may play a role in regulation of developmental processes

28 July 2018

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28 July 2018

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A motif co-occurrence approach for genome-wide prediction of transcription-factor-binding sites in Escherichia coli

28 July 2018

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Escherichia coli spotted double-strand DNA microarrays: RNA extraction, labeling, hybridization, quality control, and data management

28 July 2018

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28 July 2018

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The regulation of transcription initiation in bacteria

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798280

High-resolution profiling of histone methylations in the human genome

28 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003246

Genome-wide analysis of SREBP-1 binding in mouse liver chromatin reveals a preference for promoter proximal binding to a new motif.

21 January 2018

1 reference

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A Statistical Framework for the Analysis of ChIP-Seq Data

21 January 2018

1 reference

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PICS: probabilistic inference for ChIP-seq.

21 January 2018

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An effective approach for identification of in vivo protein-DNA binding sites from paired-end ChIP-Seq data

21 January 2018

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Estimating the Dimension of a Model

21 January 2018

1 reference

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Learning probabilistic models of cis-regulatory modules that represent logical and spatial aspects

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003246

Mapping E. coli RNA polymerase and associated transcription factors and identifying promoters genome-wide

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003246

SOAP2: an improved ultrafast tool for short read alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003246

Purification and characterization of murine retroviral reverse transcriptase expressed in Escherichia coli

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24146601

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PCBI.1003246

1 reference

journals/ploscb/ChungPMGKLK13

19 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

19 August 2017

PubMed publication ID

24146601

1 reference