(Q30696311)

20 August 2017

3 references

8 September 2019

22 October 2019

25 January 2021

A review of microsatellite markers and their applications in rice breeding programs to improve blast disease resistance (English)

1 reference

20 August 2017

1 reference

8 September 2019

1 reference

22 October 2019

1 reference

1 reference

25 January 2021

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Mohd Rafii Yusop

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

M A Latif

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

5

Harun A Rahim

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

4

Adam B Puteh

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

author name string

Mohd R Ismail

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Kh Nurul Islam

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

language of work or name

English

0 references

publication date

14 November 2013

4 references

International Journal of Molecular Sciences

20 August 2017

8 September 2019

22 October 2019

25 January 2021

4 references

8 September 2019

22 October 2019

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

25 January 2021

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

issue

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

page(s)

22499-22528

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 3.0 Unported

7 June 2020

copyright license

3 references

8 September 2019

22 October 2019

Blast resistance in rice: a review of conventional breeding to molecular approaches.

25 January 2021

0 references

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

HighSSR: high-throughput SSR characterization and locus development from next-gen sequencing data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

SNPs in stress-responsive rice genes: validation, genotyping, functional relevance and population structure

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Comparison of next-generation sequencing systems

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Fine mapping of qSTV11(KAS), a major QTL for rice stripe disease resistance

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Distinct evolutionary patterns of Oryza glaberrima deciphered by genome sequencing and comparative analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh].

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Microsatellites, from molecules to populations and back

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

When technology meets conservation: increased microsatellite marker production using 454 genome sequencing on the endangered Okaloosa Darter (Etheostoma okaloosae).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Towards the understanding of complex traits in rice: substantially or superficially?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Genic non-coding microsatellites in the rice genome: characterization, marker design and use in assessing genetic and evolutionary relationships among domesticated groups

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Microsatellite discovery by deep sequencing of enriched genomic libraries

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

The pi40 gene for durable resistance to rice blast and molecular analysis of pi40-advanced backcross breeding lines

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Rice molecular breeding laboratories in the genomics era: Current status and future considerations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Development and evaluation of a high-throughput, low-cost genotyping platform based on oligonucleotide microarrays in rice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

The extent of linkage disequilibrium in rice (Oryza sativa L.).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

The blast resistance gene Pi37 encodes a nucleotide binding site leucine-rich repeat protein and is a member of a resistance gene cluster on rice chromosome 1.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

A novel gene, Pi40(t), linked to the DNA markers derived from NBS-LRR motifs confers broad spectrum of blast resistance in rice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Genome-wide patterns of nucleotide polymorphism in domesticated rice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

A genome-wide microsatellite polymorphism database for the indica and japonica rice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

The Association of Size Differences with Seed-Coat Pattern and Pigmentation in PHASEOLUS VULGARIS.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

The broad-spectrum blast resistance gene Pi9 encodes a nucleotide-binding site-leucine-rich repeat protein and is a member of a multigene family in rice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

The map-based sequence of the rice genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Genetic structure and diversity in Oryza sativa L

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Characteristics and a comparison of three classes of microsatellite-based markers and their application in plants

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Molecular markers linked to the blast resistance gene Pi-z in rice for use in marker-assisted selection

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

How much effort is required to isolate nuclear microsatellites from plants?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Characterization of trinucleotide SSR motifs in wheat

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Two broad-spectrum blast resistance genes, Pi9( t) and Pi2( t), are physically linked on rice chromosome 6.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Gramene: a resource for comparative grass genomics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Potential of (GATA)n microsatellites from rice for inter- and intra-specific variability studies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

The genetic architecture of quantitative traits

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

tA single amino acid difference distinguishes resistant and susceptible alleles of the rice blast resistance gene Pi-ta

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Primer3 on the WWW for general users and for biologist programmers

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Microsatellite marker development, mapping and applications in rice genetics and breeding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Identification and characterization of microsatellites in Norway spruce (Picea abies K.).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Construction of an 800-kb contig in the near-centromeric region of the rice blast resistance gene Pi-ta2 using a highly representative rice BAC library.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Microsatellite sequences in a conifer, Pinus sylvestris

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Frequency of microsatellite sequences in rice (Oryza sativa L.).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

A receptor kinase-like protein encoded by the rice disease resistance gene, Xa21

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

PCR-amplified microsatellites as markers in plant genetics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Abundance, polymorphism and genetic mapping of microsatellites in rice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Abundance, variability and chromosomal location of microsatellites in wheat

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Hypervariabflity of simple sequences as a general source for polymorphic DNA markers

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

A hypervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Parameters of the human genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Microsatellites for linkage analysis of genetic traits

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Characterization and genetic mapping of a short, highly repeated, interspersed DNA sequence from rice (Oryza sativa L.)

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3856076

Transferability of microsatellite and sequence tagged site markers in Oryza species.

20 June 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.).

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Genetic diversity and population structure of a diverse set of rice germplasm for association mapping.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Fast, cost-effective development of species-specific microsatellite markers by genomic sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Survey of plant short tandem DNA repeats.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Microsatellite DNA markers for rice chromosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Rice ESTs with disease-resistance gene- or defense-response gene-like sequences mapped to regions containing major resistance genes or QTLs.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Identification of a 118-kb DNA fragment containing the locus of blast resistance gene Pi-2(t) in rice.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

The eight amino-acid differences within three leucine-rich repeats between Pi2 and Piz-t resistance proteins determine the resistance specificity to Magnaporthe grisea.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

A B-lectin receptor kinase gene conferring rice blast resistance.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Genetic and physical mapping of Pi36(t), a novel rice blast resistance gene located on rice chromosome 8.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

High-resolution mapping, cloning and molecular characterization of the Pi-k ( h ) gene of rice, which confers resistance to Magnaporthe grisea.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Development of PCR-based allele-specific and InDel marker sets for nine rice blast resistance genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Association between molecular markers and blast resistance in an advanced backcross population of rice

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Genetic dissection of rice blast resistance by QTL mapping approach using an F3 population.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Analysis of simple sequence repeat markers linked with blast disease resistance genes in a segregating population of rice (Oryza sativa).

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Divergence and allelomorphic relationship of a soybean virus resistance gene based on tightly linked DNA microsatellite and RFLP markers

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS141122499

Large-scale DNA polymorphism study of Oryza sativa and O. rufipogon reveals the origin and divergence of Asian rice

21 January 2018

1 reference

12 December 2020

Identification of five new blast resistance genes in the highly blast-resistant rice variety IR64 using a QTL mapping strategy

1 reference

12 December 2020

Tagging genes for blast resistance in rice via linkage to RFLP markers

1 reference

12 December 2020

Development of PCR-based SNP markers for rice blast resistance genes at the Piz locus

1 reference

12 December 2020

Rice Pi-ta gene Confers Resistance to the Major Pathotypes of the Rice Blast Fungus in the United States

1 reference

12 December 2020

Identification and fine mapping of Pi33, the rice resistance gene corresponding to the Magnaporthe grisea avirulence gene ACE1

1 reference

12 December 2020

Genetic and physical mapping of Pi37(t), a new gene conferring resistance to rice blast in the famous cultivar St. No. 1

1 reference

12 December 2020

Identification and characterization of a new blast resistance gene located on rice chromosome 1 through linkage and differential analyses

1 reference

12 December 2020

Pi35(t), a new gene conferring partial resistance to leaf blast in the rice cultivar Hokkai 188

1 reference

12 December 2020

Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms

1 reference

12 December 2020

Identification and mapping of Pi41, a major gene conferring resistance to rice blast in the Oryza sativa subsp. indica reference cultivar, 93-11

1 reference

12 December 2020

Identification and fine mapping of Pi39(t), a major gene conferring the broad-spectrum resistance to Magnaporthe oryzae

1 reference

12 December 2020

Identifiers

DOI

10.3390/IJMS141122499

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24240810%20AND%20SRC:MED&resulttype=core&format=json