(Q33424957)

English

Genic non-coding microsatellites in the rice genome: characterization, marker design and use in assessing genetic and evolutionary relationships among domesticated groups

scientific article

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

26 July 2017

Genic non-coding microsatellites in the rice genome: characterization, marker design and use in assessing genetic and evolutionary relationships among domesticated groups (English)

1 reference

Europe PubMed Central

26 July 2017

1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

object named as

Ashok Kumar Singh

3

0 references

author name string

Swarup Kumar Parida

1

1 reference

Europe PubMed Central

26 July 2017

Vivek Dalal

2

1 reference

Europe PubMed Central

26 July 2017

Nagendra Kumar Singh

4

1 reference

Europe PubMed Central

26 July 2017

Trilochan Mohapatra

5

1 reference

Europe PubMed Central

26 July 2017

language of work or name

0 references

publication date

31 March 2009

1 reference

Europe PubMed Central

26 July 2017

1 reference

Europe PubMed Central

26 July 2017

10

1 reference

Europe PubMed Central

26 July 2017

140

1 reference

Europe PubMed Central

26 July 2017

https://scigraph.springernature.com/pub.10.1186/1471-2164-10-140

0 references

Genome-wide patterns of nucleotide polymorphism in domesticated rice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

A set of multiplex panels of microsatellite markers for rapid molecular characterization of rice accessions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

A genome-wide microsatellite polymorphism database for the indica and japonica rice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Conservation of noncoding microsatellites in plants: implication for gene regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Distinct patterns of SSR distribution in the Arabidopsis thaliana and rice genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

The map-based sequence of the rice genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Genetic structure and diversity in Oryza sativa L

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Genic microsatellite markers in plants: features and applications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

An SNP resource for rice genetics and breeding based on subspecies indica and japonica genome alignments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Microsatellites within genes: structure, function, and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

The Eukaryotic Promoter Database EPD: the impact of in silico primer extension

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Genetic analysis of traditional and evolved Basmati and non-Basmati rice varieties by using fluorescence-based ISSR-PCR and SSR markers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Trinucleotide repeats: mechanisms and pathophysiology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Enrichment of regulatory signals in conserved non-coding genomic sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Myotonic dystrophy type 2 caused by a CCTG expansion in intron 1 of ZNF9

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length variation, transposon associations, and genetic marker potential

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

VISTA : visualizing global DNA sequence alignments of arbitrary length

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Trinucleotide repeats are clustered in regulatory genes in Saccharomyces cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Examining rates and patterns of nucleotide substitution in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Selection against frameshift mutations limits microsatellite expansion in coding DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Origin, dispersal, cultivation and variation of rice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Embryonic epsilon and gamma globin genes of a prosimian primate (Galago crassicaudatus). Nucleotide and amino acid sequences, developmental regulation and phylogenetic footprints.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Mathematical model for studying genetic variation in terms of restriction endonucleases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

21 June 2018

Genome-wide investigation of intron length polymorphisms and their potential as molecular markers in rice (Oryza sativa L.).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

31 October 2018

Unigene derived microsatellite markers for the cereal genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

31 October 2018

Development and mapping of EST-derived simple sequence repeat markers for hexaploid wheat

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

31 October 2018

The GA octodinucleotide repeat binding factor BBR participates in the transcriptional regulation of the homeobox gene Bkn3.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

31 October 2018

Conserved Noncoding Sequences among Cultivated Cereal Genomes Identify Candidate Regulatory Sequence Elements and Patterns of Promoter Evolution[W]

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

31 October 2018

Distinct amplification of an untranslated regulatory sequence in the egfr gene contributes to early steps in breast cancer development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

31 October 2018

Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

31 October 2018

Reduced FMRP and increased FMR1 transcription is proportionally associated with CGG repeat number in intermediate-length and premutation carriers.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

31 October 2018

Distribution of trinucleotide microsatellites in different categories of mammalian genomic sequence: implications for human genetic diseases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680414

31 October 2018

A novel feature of microsatellites in plants: a distribution gradient along the direction of transcription

1 reference

https://pubmed.ncbi.nlm.nih.gov/19335879

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microsatellite variation associated with prolactin expression and growth of salt-challenged tilapia

1 reference

https://pubmed.ncbi.nlm.nih.gov/19335879

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A CT repeat in the promoter of the chicken malic enzyme gene is essential for function at an alternative transcription start site

1 reference

https://pubmed.ncbi.nlm.nih.gov/19335879

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Development of genome-wide DNA polymorphism database for map-based cloning of rice genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19335879

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Using cauliflower to find conserved non-coding regions in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19335879

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Optimizing parental selection for genetic linkage maps

1 reference

https://pubmed.ncbi.nlm.nih.gov/19335879

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-10-140

1 reference

Europe PubMed Central

26 July 2017

Dimensions Publication ID

0 references

1 reference

Europe PubMed Central

26 July 2017

1 reference

Europe PubMed Central

26 July 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q33424957&oldid=1961351002"