(Q31007659)

5 November 2017

An allosteric mechanism inferred from molecular dynamics simulations on phospholamban pentamer in lipid membranes (English)

1 reference

molecular dynamics simulation

5 November 2017

0 references

2

Dong-Qing Wei

1 reference

5 November 2017

3

Jing-Fang Wang

1 reference

5 November 2017

4

Kuo-Chen Chou

1 reference

5 November 2017

Peng Lian

1

1 reference

PMCID

3078132

5 November 2017

language of work or name

English

0 references

publication date

15 April 2011

1 reference

5 November 2017

1 reference

5 November 2017

6

1 reference

5 November 2017

4

1 reference

5 November 2017

e18587

1 reference

Creative Commons Attribution 4.0 International

5 November 2017

start time

15 April 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Recent Progress on Computer-Aided Inhibitor Design of H5N1 Influenza A Virus

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Effect of membrane thickness on conformational sampling of phospholamban from computer simulations

28 July 2018

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Drug candidates from traditional chinese medicines

28 July 2018

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Molecular dynamics simulations of asymmetric NaCl and KCl solutions separated by phosphatidylcholine bilayers: potential drops and structural changes induced by strong Na+-lipid interactions and finite size effects

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Structural and dynamic basis of phospholamban and sarcolipin inhibition of Ca(2+)-ATPase

28 July 2018

1 reference

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Comparing the structure and dynamics of phospholamban pentamer in its unphosphorylated and pseudo-phosphorylated states.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Insights from modeling the 3D structure of NAD(P)H-dependent D-xylose reductase of Pichia stipitis and its binding interactions with NAD and NADP.

28 July 2018

1 reference

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The role of phosphorylation on the structure and dynamics of phospholamban: a model from molecular simulations

28 July 2018

1 reference

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Structural changes in the cytoplasmic domain of phospholamban by phosphorylation at Ser16: a molecular dynamics study.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Structure determination of symmetric homo-oligomers by a complete search of symmetry configuration space, using NMR restraints and van der Waals packing.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Phosphorylation-dependent conformational switch in spin-labeled phospholamban bound to SERCA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Scalable molecular dynamics with NAMD

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

The structure of phospholamban pentamer reveals a channel-like architecture in membranes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Mapping the interaction surface of a membrane protein: unveiling the conformational switch of phospholamban in calcium pump regulation.

28 July 2018

1 reference

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The alpha-helical propensity of the cytoplasmic domain of phospholamban: a molecular dynamics simulation of the effect of phosphorylation and mutation.

28 July 2018

1 reference

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Structure and dynamics of phospholamban in solution and in membrane bilayer: computer simulations

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Phospholamban structural dynamics in lipid bilayers probed by a spin label rigidly coupled to the peptide backbone

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Sarcoplasmic reticulum Ca-ATPase-phospholamban interactions and dilated cardiomyopathy

28 July 2018

1 reference

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NMR solution structure and topological orientation of monomeric phospholamban in dodecylphosphocholine micelles

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Phospholamban: a crucial regulator of cardiac contractility

28 July 2018

1 reference

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Dilated cardiomyopathy and heart failure caused by a mutation in phospholamban

28 July 2018

1 reference

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28 July 2018

The Protein Data Bank

1 reference

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Direct spectroscopic detection of molecular dynamics and interactions of the calcium pump and phospholamban.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

A fluorescence energy transfer method for analyzing protein oligomeric structure: application to phospholamban

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Canonical dynamics: Equilibrium phase-space distributions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Phospholamban: protein structure, mechanism of action, and role in cardiac function

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Functional Co-expression of the canine cardiac Ca2+ pump and phospholamban in Spodoptera frugiperda (Sf21) cells reveals new insights on ATPase regulation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Phospholamban inhibitory function is activated by depolymerization

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Low-frequency collective motion in biomacromolecules and its biological functions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Phospholamban forms Ca2+-selective channels in lipid bilayers.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Low-frequency resonance and cooperativity of hemoglobin.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078132

Control of the calcium pump of cardiac sarcoplasmic reticulum. A specific role for the pentameric structure of phospholamban?

28 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Serine 16 phosphorylation induces an order-to-disorder transition in monomeric phospholamban

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

(1)H/(15)N heteronuclear NMR spectroscopy shows four dynamic domains for phospholamban reconstituted in dodecylphosphocholine micelles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Structure and topology of monomeric phospholamban in lipid membranes determined by a hybrid solution and solid-state NMR approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Phospholamban pentamer quaternary conformation determined by in-gel fluorescence anisotropy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Structure, dynamics, and ion conductance of the phospholamban pentamer

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Molecular modeling of two CYP2C19 SNPs and its implications for personalized drug design

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Insights from studying the mutation-induced allostery in the M2 proton channel by molecular dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Insight into the molecular switch mechanism of human Rab5a from molecular dynamics simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Structural flexibility and interactions of PTP1B's S-loop.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Insights from investigating the interactions of adamantane-based drugs with the M2 proton channel from the H1N1 swine virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Binding of CYP2C9 with diverse drugs and its implications for metabolic mechanism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Role of structural bioinformatics and traditional Chinese medicine databases in pharmacogenomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Molecular dynamics studies on T1 lipase: insight into a double-flap mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Binding mechanism of H5N1 influenza virus neuraminidase with ligands and its implication for drug design

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Possible drug candidates for Alzheimer's disease deduced from studying their binding interactions with alpha7 nicotinic acetylcholine receptor.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Comparison of simple potential functions for simulating liquid water

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Structural dynamics and topology of phospholamban in oriented lipid bilayers using multidimensional solid-state NMR

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018587

Biochemical regulation of sarcoplasmic reticulum Cl- channel from human atrial myocytes: involvement of phospholamban

21 January 2018

1 reference

12 December 2020

Effects of Ser16 phosphorylation on the allosteric transitions of phospholamban/Ca(2+)-ATPase complex

1 reference

12 December 2020

Activation by adenosine triphosphate in the phosphorylation kinetics of sodium and potassium ion transport adenosine triphosphatase

1 reference

12 December 2020

Reexamination of the role of the leucine/isoleucine zipper residues of phospholamban in inhibition of the Ca2+ pump of cardiac sarcoplasmic reticulum

1 reference

12 December 2020

Quantitative characterization of ion pairing and cluster formation in strong 1:1 electrolytes

1 reference

12 December 2020

Molecular dynamics studies on structure and dynamics of phospholamban monomer and pentamer in membranes

1 reference

12 December 2020

3D structure modeling of cytochrome P450 2C19 and its implication for personalized drug design

1 reference

12 December 2020

Solid-state NMR and rigid body molecular dynamics to determine domain orientations of monomeric phospholamban

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0018587

Identifiers

DOI

1 reference

5 November 2017

0 references

1 reference

5 November 2017

1 reference

PMCID

3078132