(Q31103730)

28 June 2017

title

metaBIT, an integrative and automated metagenomic pipeline for analysing microbial profiles from high-throughput sequencing shotgun data (English)

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high-throughput sequencing

28 June 2017

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4

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28 June 2017

Kristian Ebbesen Hanghøj

series ordinal

3

object named as

Kristian Hanghøj

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Clio Der Sarkissian

series ordinal

2

object named as

Clio Der Sarkissian

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28 June 2017

1

Guillaume Louvel

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28 June 2017

publication date

30 May 2016

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Molecular Ecology Resources

28 June 2017

published in

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28 June 2017

volume

16

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28 June 2017

issue

6

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28 June 2017

page(s)

1415-1427

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Sequencing ancient calcified dental plaque shows changes in oral microbiota with dietary shifts of the Neolithic and Industrial revolutions

28 June 2017

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Evolutionary Genomics and Conservation of the Endangered Przewalski's Horse

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Genomics of schizophrenia: time to consider the gut microbiome?

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Cross-biome metagenomic analyses of soil microbial communities and their functional attributes.

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Resistance of degraded hair shafts to contaminant DNA.

21 January 2018

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Whole-genome shotgun sequencing of mitochondria from ancient hair shafts

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Intraspecific phylogenetic analysis of Siberian woolly mammoths using complete mitochondrial genomes

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Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes

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Characterization of Mycobacterium orygis as M. tuberculosis complex subspecies

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mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters

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Eighteenth-century genomes show that mixed infections were common at time of peak tuberculosis in Europe

21 January 2018

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Fast gapped-read alignment with Bowtie 2

21 January 2018

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Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale

21 January 2018

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The Sequence Alignment/Map format and SAMtools

21 January 2018

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Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments

21 January 2018

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Sequencing technologies - the next generation

21 January 2018

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Sequencing the nuclear genome of the extinct woolly mammoth

21 January 2018

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Interactive metagenomic visualization in a Web browser

21 January 2018

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Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

21 January 2018

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Reconstructing ancient genomes and epigenomes

21 January 2018

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21 January 2018

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A human gut microbial gene catalogue established by metagenomic sequencing

21 January 2018

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A metagenome-wide association study of gut microbiota in type 2 diabetes

21 January 2018

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21 January 2018

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Ancient human genome sequence of an extinct Palaeo-Eskimo

21 January 2018

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An Aboriginal Australian genome reveals separate human dispersals into Asia

21 January 2018

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Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX.

21 January 2018

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Prehistoric genomes reveal the genetic foundation and cost of horse domestication

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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A Mathematical Theory of Communication

21 January 2018

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Microbial diversity in the deep sea and the underexplored "rare biosphere"

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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A core gut microbiome in obese and lean twins

21 January 2018

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Pathogens and host immunity in the ancient human oral cavity

21 January 2018

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21 January 2018

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Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification

21 January 2018

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MetaPhlAn2 for enhanced metagenomic taxonomic profiling

21 January 2018

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21 January 2018

Identifiers

DOI

10.1111/1755-0998.12546

1 reference

28 June 2017

1 reference