(Q33246717)

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Identifying an interaction site between MutH and the C-terminal domain of MutL by crosslinking, affinity purification, chemical coding and mass spectrometry

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scholarly article

1 reference

Europe PubMed Central

24 July 2017

Identifying an interaction site between MutH and the C-terminal domain of MutL by crosslinking, affinity purification, chemical coding and mass spectrometry (English)

1 reference

Europe PubMed Central

24 July 2017

object named as

Jan Kosinski

2

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4

object named as

Laura Manelyte

1 reference

Europe PubMed Central

24 July 2017

Bernhard Spengler

8

object named as

Bernhard Spengler

1 reference

Europe PubMed Central

24 July 2017

author name string

Robert Ahrends

1

1 reference

Europe PubMed Central

24 July 2017

Dieter Kirsch

3

1 reference

Europe PubMed Central

24 July 2017

Luis Giron-Monzon

5

1 reference

Europe PubMed Central

24 July 2017

Lars Hummerich

6

1 reference

Europe PubMed Central

24 July 2017

Oliver Schulz

7

1 reference

Europe PubMed Central

24 July 2017

Peter Friedhoff

9

1 reference

Europe PubMed Central

24 July 2017

language of work or name

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publication date

13 June 2006

1 reference

Europe PubMed Central

24 July 2017

Nucleic Acids Research

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Europe PubMed Central

24 July 2017

34

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Europe PubMed Central

24 July 2017

3169-3180

1 reference

Europe PubMed Central

24 July 2017

10

1 reference

Europe PubMed Central

24 July 2017

The Genomes On Line Database (GOLD) v.2: a monitor of genome projects worldwide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Mapping protein interfaces by a trifunctional cross-linker combined with MALDI-TOF and ESI-FTICR mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Identification and mapping of protein-protein interactions by a combination of cross-linking, cleavage, and proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

DNA mismatch repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Mass spectrometric detection of biotinylated peptides captured by avidin functional affinity electrophoresis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

The biotin-streptavidin interaction can be reversibly broken using water at elevated temperatures

1 reference

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14 July 2018

Inherited susceptibility to colorectal cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Chemical cross-linking and FTICR mass spectrometry for protein structure characterization.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Structure of the MutL C-terminal domain: a model of intact MutL and its roles in mismatch repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

New chemical crosslinking methods for the identification of transient protein-protein interactions with multiprotein complexes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Quantification in proteomics through stable isotope coding: a review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Chemical cross-linking and mass spectrometry for mapping three-dimensional structures of proteins and protein complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Formation of a DNA mismatch repair complex mediated by ATP.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

DNA mismatch repair: molecular mechanisms and biological function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Chemical cross-linking and mass spectrometry for protein structural modeling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

GeneSilico protein structure prediction meta-server.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

A modular cross-linking approach for exploring protein interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Site-specific protein modification to identify the MutL interface of MutH.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Haemophilus influenzae and Vibrio cholerae genes for mutH are able to fully complement a mutH defect in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Mutational analysis of the MutH protein from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

A generic strategy to analyze the spatial organization of multi-protein complexes by cross-linking and mass spectrometry.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Using photolabile ligands in drug discovery and development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Quantitative analysis of complex protein mixtures using isotope-coded affinity tags

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Transformation of MutL by ATP binding and hydrolysis: a switch in DNA mismatch repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Peptide and protein identification by matrix-assisted laser desorption ionization (MALDI) and MALDI-post-source decay time-of-flight mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

An improved PCR-mutagenesis strategy for two-site mutagenesis or sequence swapping between related genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Structural basis for MutH activation in E.coli mismatch repair and relationship of MutH to restriction endonucleases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Coupling of MALDI-TOF mass analysis to the separation of biotinylated peptides by magnetic streptavidin beads

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Single-step purifications of His6-MutH, His6-MutL and His6-MutS repair proteins of escherichia coli K-12.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

How to measure and predict the molar absorption coefficient of a protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Benzophenone photophores in biochemistry.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Mechanisms and biological effects of mismatch repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

The DNA binding activity of MutL is required for methyl-directed mismatch repair in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

MutH complexed with hemi- and unmethylated DNAs: coupling base recognition and DNA cleavage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

Analysis of the quaternary structure of the MutL C-terminal domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

Mapping protein-protein interactions between MutL and MutH by cross-linking

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

Absolute quantification of specific proteins in complex mixtures using visible isotope-coded affinity tags

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

Mass spectrometric detection of affinity purified crosslinked peptides.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

Element-coded affinity tags for peptides and proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

Hydrolytically Deficient MutS E694A Is Defective in the MutL-dependent Activation of MutH and in the Mismatch-dependent Assembly of the MutS · MutL · Heteroduplex Complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

The coordinated functions of the E. coli MutS and MutL proteins in mismatch repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

In vitro and in vivo studies of MutS, MutL and MutH mutants: correlation of mismatch repair and DNA recombination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

PCMA: fast and accurate multiple sequence alignment based on profile consistency.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

Biophysical compensation mechanisms buffering E. coli protein-nucleic acid interactions against changing environments.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

Interaction of Escherichia coli MutS and MutL at a DNA mismatch

1 reference

https://pubmed.ncbi.nlm.nih.gov/16772401

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Substituted-cysteine accessibility method

1 reference

https://pubmed.ncbi.nlm.nih.gov/16772401

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Escherichia coli MutL protein physically interacts with MutH and stimulates the MutH-associated endonuclease activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/16772401

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mapping protein-protein interactions by bioinformatics and cross-linking

1 reference

https://pubmed.ncbi.nlm.nih.gov/16772401

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Discrimination and versatility in mismatch repair

1 reference

https://pubmed.ncbi.nlm.nih.gov/16772401

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKL407

1 reference

Europe PubMed Central

24 July 2017

release_poztimgpprdxvbg5ntbh7epi34

1 reference

https://api.fatcat.wiki/v0/release/poztimgpprdxvbg5ntbh7epi34

24 November 2022

based on heuristic

mapped directly with Wikidata item

1 reference

Europe PubMed Central

24 July 2017

1 reference

Europe PubMed Central

24 July 2017

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