(Q33269155)

24 July 2017

Protein and DNA sequence determinants of thermophilic adaptation (English)

1 reference

24 July 2017

Eugene I. Shakhnovich

series ordinal

3

object named as

Eugene I Shakhnovich

1 reference

24 July 2017

Konstantin B Zeldovich

series ordinal

1

1 reference

PubMed ID

17222055

24 July 2017

Igor N Berezovsky

series ordinal

2

1 reference

PubMed ID

17222055

24 July 2017

language of work or name

1 reference

30 November 2006

1 reference

PLOS Computational Biology

24 July 2017

1 reference

24 July 2017

3

1 reference

24 July 2017

e5

1 reference

24 July 2017

1

1 reference

Creative Commons Attribution 4.0 International

24 July 2017

start time

12 January 2007

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

On the correlation between genomic G+C content and optimal growth temperature in prokaryotes: data quality and confounding factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Base-stacking and base-pairing contributions into thermal stability of the DNA double helix

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Solving the membrane protein folding problem

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Entropic stabilization of proteins and its proteomic consequences

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Physics and evolution of thermophilic adaptation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Protein structure and evolutionary history determine sequence space topology

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Predicting transmembrane beta-barrels in proteomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Natural selection of more designable folds: a mechanism for thermophilic adaptation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

The stability of thermophilic proteins: a study based on comprehensive genome comparison

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

High guanine-cytosine content is not an adaptation to high temperature: a comparative analysis amongst prokaryotes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Identification of thermophilic species by the amino acid compositions deduced from their genomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Transproteomic evidence of a loop-deletion mechanism for enhancing protein thermostability

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Protein thermostability above 100 degreesC: a key role for ionic interactions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

A free energy analysis of nucleic acid base stacking in aqueous solution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

SCOP: a structural classification of proteins database for the investigation of sequences and structures

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

A comparative study of the thermal stability of the vertebrate eye lens: Antarctic ice fish to the desert iguana

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Design and structural analysis of alternative hydrophobic core packing arrangements in bacteriophage T4 lysozyme

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Prokaryotes that grow optimally in acid have purine-poor codons in long open reading frames.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Optimal growth temperature of prokaryotes correlates with class II amino acid composition

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

PGTdb: a database providing growth temperatures of prokaryotes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Proteomic signatures: amino acid and oligopeptide compositions differentiate among phyla.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Optimum growth temperature and the base composition of open reading frames in prokaryotes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Thermophilic prokaryotes have characteristic patterns of codon usage, amino acid composition and nucleotide content

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Genomic correlates of hyperthermostability, an update.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Amino acid composition of genomes, lifestyles of organisms, and evolutionary trends: a global picture with correspondence analysis

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Elucidation of factors responsible for enhanced thermal stability of proteins: a structural genomics based study

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Stability and stabilization of globular proteins in solution

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Structural differences between mesophilic, moderately thermophilic and extremely thermophilic protein subunits: results of a comprehensive survey

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Important amino acid properties for enhanced thermostability from mesophilic to thermophilic proteins

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

The stability of proteins in extreme environments

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Structural and Genomic Correlates of Hyperthermostability

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769408

Correlations between genomic GC levels and optimal growth temperatures in prokaryotes

10 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17222055

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Theoretical studies of protein-folding thermodynamics and kinetics

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17222055

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Proteins with selected sequences fold into unique native conformation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17222055

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PCBI.0030005

1 reference

journals/ploscb/ZeldovichBS07

24 July 2017

1 reference

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

24 July 2017

1 reference

PubMed ID

17222055