(Q33312549)

25 July 2017

Single-molecule tracking of mRNA exiting from RNA polymerase II (English)

1 reference

25 July 2017

5

Patrick Cramer

1 reference

25 July 2017

Joanna Andrecka

1

1 reference

25 July 2017

Robert Lewis

2

1 reference

25 July 2017

Florian Brückner

3

1 reference

25 July 2017

Elisabeth Lehmann

4

1 reference

25 July 2017

Jens Michaelis

6

1 reference

25 July 2017

language of work or name

English

0 references

publication date

27 December 2007

1 reference

Proceedings of the National Academy of Sciences of the United States of America

25 July 2017

1 reference

25 July 2017

105

1 reference

25 July 2017

1

1 reference

25 July 2017

135-140

1 reference

Structural basis for transcription elongation by bacterial RNA polymerase

25 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

CPD damage recognition by transcribing RNA polymerase II

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Initial transcription by RNA polymerase proceeds through a DNA-scrunching mechanism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Conformational heterogeneity in RNA polymerase observed by single-pair FRET microscopy.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Protein structure by mechanical triangulation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Long time scale blinking kinetics of cyanine fluorophores conjugated to DNA and its effect on Förster resonance energy transfer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Direct observation of abortive initiation and promoter escape within single immobilized transcription complexes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Retention of transcription initiation factor sigma70 in transcription elongation: single-molecule analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Direct observation of base-pair stepping by RNA polymerase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Pulsed interleaved excitation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

The dynamic machinery of mRNA elongation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Structures of complete RNA polymerase II and its subcomplex, Rpb4/7.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

UCSF Chimera--a visualization system for exploratory research and analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Fluorescence-aided molecule sorting: analysis of structure and interactions by alternating-laser excitation of single molecules

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Structural basis of transcription: separation of RNA from DNA by RNA polymerase II

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Backtracking by single RNA polymerase molecules observed at near-base-pair resolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Myosin V walks hand-over-hand: single fluorophore imaging with 1.5-nm localization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

The initiation-elongation transition: lateral mobility of RNA in RNA polymerase II complexes is greatly reduced at +8/+9 and absent by +23.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Single molecule analysis of RNA polymerase elongation reveals uniform kinetic behavior

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Using mechanical force to probe the mechanism of pausing and arrest during continuous elongation by Escherichia coli RNA polymerase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Integrating mRNA processing with transcription

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Strong natural pausing by RNA polymerase II within 10 bases of transcription start may result in repeated slippage and reextension of the nascent RNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Recent advances in FRET: distance determination in protein-DNA complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

A structural model of transcription elongation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Architecture of RNA polymerase II and implications for the transcription mechanism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Transcription elongation: structural basis and mechanisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Fluorescence spectroscopy of single biomolecules.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Fluorescence characteristics of 5-carboxytetramethylrhodamine linked covalently to the 5' end of oligonucleotides: multiple conformers of single-stranded and double-stranded dye-DNA complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Probing the interaction between two single molecules: fluorescence resonance energy transfer between a single donor and a single acceptor.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

Imaging of single molecule diffusion

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2224174

RNA emerging from the active site of RNA polymerase II interacts with the Rpb7 subunit

21 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0703815105

ADP-induced rocking of the kinesin motor domain revealed by single-molecule fluorescence polarization microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0703815105

A Single-Molecule Study of RNA Catalysis and Folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0703815105

DNA-binding orientation and domain conformation of the E. coli rep helicase monomer bound to a partial duplex junction: single-molecule studies of fluorescently labeled enzymes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0703815105

Promoter binding, initiation, and elongation by bacteriophage T7 RNA polymerase. A single-molecule view of the transcription cycle.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0703815105

Direct observation of DNA rotation during transcription by Escherichia coli RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0703815105

Backtracking determines the force sensitivity of RNAP II in a factor-dependent manner

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0703815105

RNA polymerase II transcription complexes may become arrested if the nascent RNA is shortened to less than 50 nucleotides

21 January 2018

1 reference

12 December 2020

Binding of TFIIB to RNA polymerase II: Mapping the binding site for the TFIIB zinc ribbon domain within the preinitiation complex

1 reference

12 December 2020

Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS

1 reference

12 December 2020

Unravelling the mechanism of RNA-polymerase forward motion by using mechanical force

1 reference

12 December 2020

The role of the transcription bubble and TFIIB in promoter clearance by RNA polymerase II

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0703815105

1 reference

release_mi3tdq6xrvfmrnvgms3jpv2mcm

25 July 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/mi3tdq6xrvfmrnvgms3jpv2mcm

24 November 2022

mapped directly with Wikidata item

PMCID

2224174

1 reference

25 July 2017

1 reference