(Q33312964)

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Probing host pathogen cross-talk by transcriptional profiling of both Mycobacterium tuberculosis and infected human dendritic cells and macrophages

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scholarly article

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Europe PubMed Central

PubMed publication ID

25 July 2017

Probing host pathogen cross-talk by transcriptional profiling of both Mycobacterium tuberculosis and infected human dendritic cells and macrophages (English)

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Europe PubMed Central

PubMed publication ID

25 July 2017

Mycobacterium tuberculosis

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1 reference

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Olivier Neyrolles

12

object named as

Olivier Neyrolles

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Brigitte Gicquel

8

object named as

Brigitte Gicquel

0 references

Ludovic Tailleux

object named as

Ludovic Tailleux

1

0 references

Simon J. Waddell

object named as

Simon J Waddell

2

0 references

Alessandra Mortellaro

object named as

Alessandra Mortellaro

4

0 references

Mattia Pelizzola

object named as

Mattia Pelizzola

3

0 references

object named as

Neil G Stoker

9

0 references

object named as

Philip D Butcher

10

0 references

Paola Ricciardi-Castagnoli

7

object named as

Paola Ricciardi Castagnoli

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

author name string

Michael Withers

5

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Antoine Tanne

6

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Maria Foti

11

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

language of work or name

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publication date

2 January 2008

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Europe PubMed Central

PubMed publication ID

25 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

3

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

1

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

e1403

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Europe PubMed Central

PubMed publication ID

25 July 2017

copyright license

Creative Commons Attribution 4.0 International

2 January 2008

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April 2022 Public Data File from Crossref

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describes a project that uses

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Limma

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Europe PubMed Central

22 June 2022

https://europepmc.org/article/PMC/2151136

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

A highly conserved transcriptional repressor controls a large regulon involved in lipid degradation in Mycobacterium smegmatis and Mycobacterium tuberculosis

1 reference

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21 June 2018

Mycobacterium tuberculosis DosS is a redox sensor and DosT is a hypoxia sensor

1 reference

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21 June 2018

RNA profiling in host-pathogen interactions

1 reference

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21 June 2018

SOCS proteins, cytokine signalling and immune regulation

1 reference

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21 June 2018

Microarray analysis of whole genome expression of intracellular Mycobacterium tuberculosis

1 reference

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21 June 2018

Transcriptomic analysis identifies growth rate modulation as a component of the adaptation of mycobacteria to survival inside the macrophage.

1 reference

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21 June 2018

Mycobacterial bacilli are metabolically active during chronic tuberculosis in murine lungs: insights from genome-wide transcriptional profiling

1 reference

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21 June 2018

A gene cluster encoding cholesterol catabolism in a soil actinomycete provides insight into Mycobacterium tuberculosis survival in macrophages

1 reference

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21 June 2018

AMDA: an R package for the automated microarray data analysis

1 reference

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21 June 2018

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

1 reference

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21 June 2018

LppX is a lipoprotein required for the translocation of phthiocerol dimycocerosates to the surface of Mycobacterium tuberculosis

1 reference

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21 June 2018

Expression profiling of host pathogen interactions: how Mycobacterium tuberculosis and the macrophage adapt to one another

1 reference

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21 June 2018

Unique transcriptome signature of Mycobacterium tuberculosis in pulmonary tuberculosis.

1 reference

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21 June 2018

Deletion of the Mycobacterium tuberculosis alpha-crystallin-like hspX gene causes increased bacterial growth in vivo

1 reference

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21 June 2018

Innate immune recognition of viral infection

1 reference

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21 June 2018

Anti-inflammatory actions of lipoxin A4 and aspirin-triggered lipoxin are SOCS-2 dependent

1 reference

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21 June 2018

All four Mycobacterium tuberculosis glnA genes encode glutamine synthetase activities but only GlnA1 is abundantly expressed and essential for bacterial homeostasis

1 reference

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21 June 2018

Changes in energy metabolism of Mycobacterium tuberculosis in mouse lung and under in vitro conditions affecting aerobic respiration

1 reference

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21 June 2018

Cell biology of mycobacterium tuberculosis phagosome.

1 reference

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21 June 2018

Dormancy phenotype displayed by extracellular Mycobacterium tuberculosis within artificial granulomas in mice

1 reference

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21 June 2018

The influence of reduced oxygen availability on pathogenicity and gene expression in Mycobacterium tuberculosis

1 reference

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21 June 2018

The temporal expression profile of Mycobacterium tuberculosis infection in mice.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Two sensor kinases contribute to the hypoxic response of Mycobacterium tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

The Gene Ontology (GO) database and informatics resource

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

GTPases and reactive oxygen species: switches for killing and signaling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Gene expression profiling detects patterns of human macrophage responses following Mycobacterium tuberculosis infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Inhibition of respiration by nitric oxide induces a Mycobacterium tuberculosis dormancy program

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Transcriptional Adaptation of Mycobacterium tuberculosis within Macrophages: Insights into the Phagosomal Environment

1 reference

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21 June 2018

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Glutamine synthetase GlnA1 is essential for growth of Mycobacterium tuberculosis in human THP-1 macrophages and guinea pigs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Rv3133c/dosR is a transcription factor that mediates the hypoxic response of Mycobacterium tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Unique gene expression profiles of human macrophages and dendritic cells to phylogenetically distinct parasites

1 reference

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21 June 2018

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

1 reference

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21 June 2018

Opinion: Interpretation of the complexity of innate immune responses by functional genomics.

1 reference

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21 June 2018

Dissection of the heat-shock response in Mycobacterium tuberculosis using mutants and microarrays

1 reference

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21 June 2018

Evaluation of a nutrient starvation model of Mycobacterium tuberculosis persistence by gene and protein expression profiling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Stereotyped and specific gene expression programs in human innate immune responses to bacteria

1 reference

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21 June 2018

Human macrophage activation programs induced by bacterial pathogens

1 reference

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21 June 2018

Reprogramming of the macrophage transcriptome in response to interferon-gamma and Mycobacterium tuberculosis: signaling roles of nitric oxide synthase-2 and phagocyte oxidase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Changes in gene expression in macrophages infected with Mycobacterium tuberculosis: a combined transcriptomic and proteomic approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Mycobacterium tuberculosis: here today, and here tomorrow

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Infection of human macrophages and dendritic cells with Mycobacterium tuberculosis induces a differential cytokine gene expression that modulates T cell response

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Dendritic cells are early cellular targets of Listeria monocytogenes after intestinal delivery and are involved in bacterial spread in the host.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Entry and survival of Salmonella typhimurium in dendritic cells and presentation of recombinant antigens do not require macrophage-specific virulence factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

glnE is an essential gene in Mycobacterium tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Interaction of Mycobacterium avium with human monocyte-derived dendritic cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Persistence of Mycobacterium tuberculosis in macrophages and mice requires the glyoxylate shunt enzyme isocitrate lyase

1 reference

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21 June 2018

Reactive oxygen and nitrogen intermediates in the relationship between mammalian hosts and microbial pathogens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Listeria monocytogenes-infected human dendritic cells: uptake and host cell response

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

KEGG: kyoto encyclopedia of genes and genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Identification of a virulence gene cluster of Mycobacterium tuberculosis by signature-tagged transposon mutagenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Cluster analysis and display of genome-wide expression patterns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Increased alanine dehydrogenase activity during dormancy in Mycobacterium smegmatis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Increased exhaled nitric oxide in active pulmonary tuberculosis due to inducible NO synthase upregulation in alveolar macrophages.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

A database for post-genome analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

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1 reference

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21 June 2018

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1 reference

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21 June 2018

Inducible nitric oxide synthase in pulmonary alveolar macrophages from patients with tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Rab9 functions in transport between late endosomes and the trans Golgi network

1 reference

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21 June 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

21 June 2018

Profiling of Mycobacterium tuberculosis gene expression during human macrophage infection: upregulation of the alternative sigma factor G, a group of transcriptional regulators, and proteins with unknown function.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001403

21 January 2018

Constrained Intracellular Survival of Mycobacterium tuberculosis in Human Dendritic Cells

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001403

21 January 2018

Rac GTPase isoform-specific regulation of NADPH oxidase and chemotaxis in murine neutrophils in vivo. Role of the C-terminal polybasic domain.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001403

21 January 2018

Differential production of cytokines, reactive oxygen and nitrogen by bovine macrophages and dendritic cells stimulated with Toll-like receptor agonists.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001403

21 January 2018

The Mycobacterium tuberculosis dosRS two-component system is induced by multiple stresses.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001403

21 January 2018

Differential susceptibility of bone marrow-derived dendritic cells and macrophages to productive infection with Listeria monocytogenes.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001403

21 January 2018

Use of within-array replicate spots for assessing differential expression in microarray experiments.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001403

21 January 2018

Down-regulation of CD1 on antigen-presenting cells by infection with Mycobacterium tuberculosis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151136

31 October 2018

NOX2 Controls Phagosomal pH to Regulate Antigen Processing during Crosspresentation by Dendritic Cells

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001403

21 January 2018

The effects of reactive nitrogen intermediates on gene expression in Mycobacterium tuberculosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/18167562

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activation of human dendritic cells following infection with Mycobacterium tuberculosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/18167562

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dendritic Cells Are Host Cells for Mycobacteria In Vivo That Trigger Innate and Acquired Immunity

1 reference

https://pubmed.ncbi.nlm.nih.gov/18167562

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0001403

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

2008PLoSO...3.1403T

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

ResearchGate publication ID

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