(Q33331025)

25 July 2017

title

A new protein linear motif benchmark for multiple sequence alignment software (English)

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25 July 2017

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Claudia Chica

2

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Toby J. Gibson

object named as

Toby J Gibson

4

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author name string

Emmanuel Perrodou

1

1 reference

25 July 2017

Olivier Poch

3

1 reference

25 July 2017

Julie D Thompson

5

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25 July 2017

publication date

25 April 2008

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25 July 2017

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25 July 2017

volume

9

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25 July 2017

page(s)

213

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2105-9-213

25 July 2017

exact match

0 references

cites work

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Cyclin-dependent kinase inhibitors sensitize tumor cells to nutlin-induced apoptosis: a potent drug combination.

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14 July 2018

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14 July 2018

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Local structural disorder imparts plasticity on linear motifs.

14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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Tau aggregation is driven by a transition from random coil to beta sheet structure

14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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Recent improvements to the PROSITE database

14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

1 reference

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Multiple sequence alignment with the Clustal series of programs

14 July 2018

1 reference

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MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

14 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374782

Coupling of folding and binding for unstructured proteins

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374782

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14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374782

A comprehensive comparison of multiple sequence alignment programs

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374782

Twilight zone of protein sequence alignments

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374782

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374782

Yeast prohormone processing enzyme (KEX2 gene product) is a Ca2+-dependent serine protease

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374782

A computational strategy for the prediction of functional linear peptide motifs in proteins.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374782

Analysis and comparison of benchmarks for multiple sequence alignment

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374782

Rational drug design via intrinsically disordered protein

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374782

Peroxisomal targeting signal-1 receptor protein PEX5 from Leishmania donovani. Molecular, biochemical, and immunocytochemical characterization

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374782

Towards a reliable objective function for multiple sequence alignments

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18439277

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

SABmark--a benchmark for sequence alignment that covers the entire known fold space

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18439277

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

BAliBASE 3.0: latest developments of the multiple sequence alignment benchmark

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18439277

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-9-213

1 reference

journals/bmcbi/PerrodouCPGT08

25 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

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1 reference

25 July 2017

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