(Q33457026)

English

The first genomic and proteomic characterization of a deep-sea sulfate reducer: insights into the piezophilic lifestyle of Desulfovibrio piezophilus

scientific article

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

The first genomic and proteomic characterization of a deep-sea sulfate reducer: insights into the piezophilic lifestyle of Desulfovibrio piezophilus (English)

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

0 references

Desulfovibrio piezophilus

object named as

Desulfovibrio piezophilus

1 reference

based on heuristic

inferred from title

13

object named as

Valérie Barbe

0 references

Christian Tamburini

object named as

Christian Tamburini

7

0 references

4

object named as

Emmanuel Talla

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

author name string

Nathalie Pradel

1

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Boyang Ji

2

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Grégory Gimenez

3

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Patricia Lenoble

5

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Marc Garel

6

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Patrick Fourquet

8

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Régine Lebrun

9

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Philippe Bertin

10

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Yann Denis

11

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Matthieu Pophillat

12

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Bernard Ollivier

14

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Alain Dolla

15

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

language of work or name

0 references

publication date

30 January 2013

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

8

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

1

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

e55130

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

copyright license

Creative Commons Attribution 4.0 International

30 January 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Substrate-specific pressure-dependence of microbial sulfate reduction in deep-sea cold seep sediments of the Japan Trench

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Genetics and molecular biology of the electron flow for sulfate respiration in desulfovibrio

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

A comparative genomic analysis of energy metabolism in sulfate reducing bacteria and archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Complete Genome Sequence of the Obligate Piezophilic Hyperthermophilic Archaeon Pyrococcus yayanosii CH1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Desulfovibrio piezophilus sp. nov., a piezophilic, sulfate-reducing bacterium isolated from wood falls in the Mediterranean Sea.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

The many ways of coping with pressure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Molecular adaptations to psychrophily: the impact of 'omic' technologies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Construction and preliminary analysis of a deep-sea sediment metagenomic fosmid library from Qiongdongnan Basin, South China Sea.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Amino acid signatures of salinity on an environmental scale with a focus on the Dead Sea.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Insights into piezophily from genetic studies on the deep-sea bacterium, Photobacterium profundum SS9.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

MicroScope: a platform for microbial genome annotation and comparative genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Importance of proteins controlling initiation of DNA replication in the growth of the high-pressure-loving bacterium Photobacterium profundum SS9

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Thermodesulfatator atlanticus sp. nov., a thermophilic, chemolithoautotrophic, sulfate-reducing bacterium isolated from a Mid-Atlantic Ridge hydrothermal vent

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Large-scale transposon mutagenesis of Photobacterium profundum SS9 reveals new genetic loci important for growth at low temperature and high pressure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Exploration of the effects of high hydrostatic pressure on microbial growth, physiology and survival: perspectives from piezophysiology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Metagenomics of the deep Mediterranean, a warm bathypelagic habitat

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Bacterial adaptation to high pressure: a respiratory system in the deep-sea bacterium Shewanella violacea DSS12.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Piezophilic adaptation: a genomic point of view

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Laterally transferred elements and high pressure adaptation in Photobacterium profundum strains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Life at Depth: Photobacterium profundum Genome Sequence and Expression Analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

A comparison of proteins from Pyrococcus furiosus and Pyrococcus abyssi: barophily in the physicochemical properties of amino acids and in the genetic code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Effects of temperature and pressure on sulfate reduction and anaerobic oxidation of methane in hydrothermal sediments of Guaymas Basin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Desulfonauticus submarinus gen. nov., sp. nov., a novel sulfate-reducing bacterium isolated from a deep-sea hydrothermal vent

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Desulfovibrio hydrothermalis sp. nov., a novel sulfate-reducing bacterium isolated from hydrothermal vents

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Solute accumulation in the deep-sea bacterium Photobacterium profundum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Thermodesulfobacterium hydrogeniphilum sp. nov., a thermophilic, chemolithoautotrophic, sulfate-reducing bacterium isolated from a deep-sea hydrothermal vent at Guaymas Basin, and emendation of the genus Thermodesulfobacterium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Pressure effects on in vivo microbial processes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Desulfovibrio profundus sp. nov., a novel barophilic sulfate-reducing bacterium from deep sediment layers in the Japan Sea.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Microbiology to 10,500 meters in the deep sea.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

21 June 2018

Ecology of the bacteria of the sulphur cycle with special reference to anoxic-oxic interface environments.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055130

21 January 2018

Genomic expression pattern in Saccharomyces cerevisiae cells in response to high hydrostatic pressure.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055130

21 January 2018

Development and use of genetic system to identify genes required for efficient low-temperature growth of Psychrobacter arcticus 273-4.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055130

21 January 2018

Investigation on the causes of codon and amino acid usages variation between thermophilic Aquifex aeolicus and mesophilic Bacillus subtilis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055130

21 January 2018

The role of the codon first letter in the relationship between genomic GC content and protein amino acid composition

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055130

21 January 2018

Characterization of the autocleavage process of the Escherichia coli HtrA protein: implications for its physiological role

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055130

21 January 2018

The proteolytic activity of the HtrA (DegP) protein from Escherichia coli at low temperatures

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055130

21 January 2018

Distributions of Microbial Activities in Deep Subseafloor Sediments

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055130

21 January 2018

Phylogenetic diversity and distribution of dissimilatory sulfite reductase genes from deep-sea sediment cores

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3559428

31 October 2018

Integrated metagenomic and metaproteomic analyses of an ANME-1-dominated community in marine cold seep sediments

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0055130

21 January 2018

Sunken woods on the ocean floor provide diverse specialized habitats for microorganisms

1 reference

https://pubmed.ncbi.nlm.nih.gov/23383081

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The ocean abysses witnessed the origin of the genetic code

1 reference

https://pubmed.ncbi.nlm.nih.gov/23383081

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0055130

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

2013PLoSO...855130P

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q33457026&oldid=2145196188"