(Q33575693)

English

A predicted physicochemically distinct sub-proteome associated with the intracellular organelle of the anammox bacterium Kuenenia stuttgartiensis

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scholarly article

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Europe PubMed Central

PubMed publication ID

28 July 2017

A predicted physicochemically distinct sub-proteome associated with the intracellular organelle of the anammox bacterium Kuenenia stuttgartiensis (English)

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Jolein Gloerich

object named as

Jolein Gloerich

4

0 references

Marnix H Medema

object named as

Marnix H Medema

1

0 references

object named as

Marc Strous

7

0 references

author name string

Miaomiao Zhou

2

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Sacha A F T van Hijum

3

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Hans J C T Wessels

5

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Roland J Siezen

6

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Europe PubMed Central

PubMed publication ID

28 July 2017

language of work or name

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publication date

12 May 2010

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

11

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

299

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Cell division ring, a new cell division protein and vertical inheritance of a bacterial organelle in anammox planctomycetes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Sequence-based prediction of type III secreted proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

DNA-Prot: identification of DNA binding proteins from protein sequence information using random forest.

1 reference

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21 June 2018

Biochemistry and molecular biology of anammox bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Predicting disordered regions in proteins using the profiles of amino acid indices

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Evolutionary conservation of dual Sec translocases in the cyanelles of Cyanophora paradoxa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

A comprehensive comparison of random forests and support vector machines for microarray-based cancer classification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Another multiheme protein, hydroxylamine oxidoreductase, abundantly produced in an anammox bacterium besides the hydrazine-oxidizing enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Linking ultrastructure and function in four genera of anaerobic ammonium-oxidizing bacteria: cell plan, glycogen storage, and localization of cytochrome C proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Look on the positive side! The orientation, identification and bioenergetics of 'Archaeal' membrane-bound nitrate reductases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Structure and function of the bacterial Sec translocon.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Advantages of combined transmembrane topology and signal peptide prediction--the Phobius web server

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Molecular mechanisms of magnetosome formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Prediction of protein subcellular localization by support vector machines using multi-scale energy and pseudo amino acid composition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Isolation of a multiheme protein with features of a hydrazine-oxidizing enzyme from an anaerobic ammonium-oxidizing enrichment culture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

The surprising complexity of signal sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Mutational analysis of Salmonella translocated effector members SifA and SopD2 reveals domains implicated in translocation, subcellular localization and function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

MEME: discovering and analyzing DNA and protein sequence motifs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Methods of quantitative proteomics and their application to plant organelle characterization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Deciphering the evolution and metabolism of an anammox bacterium from a community genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Global impact and application of the anaerobic ammonium-oxidizing (anammox) bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Type I signal peptidase: an overview

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Sec-dependent protein translocation across biological membranes: evolutionary conservation of an essential protein transport pathway (review).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

INTRACELLULAR COMPARTMENTATION IN PLANCTOMYCETES

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Massive nitrogen loss from the Benguela upwelling system through anaerobic ammonium oxidation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

The protein-conducting channel SecYEG.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Anaerobic oxidation of methane and ammonium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Improved prediction of signal peptides: SignalP 3.0

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Lipoprotein trafficking in Escherichia coli

1 reference

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21 June 2018

PrediSi: prediction of signal peptides and their cleavage positions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

WebLogo: A Sequence Logo Generator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

The anammoxosome: an intracytoplasmic compartment in anammox bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

The versatile beta-barrel membrane protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Variation of the axial haem ligands and haem-binding motif as a probe of the Escherichia coli c-type cytochrome maturation (Ccm) system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Pathogenic Leptospira species express surface-exposed proteins belonging to the bacterial immunoglobulin superfamily

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Touch and go: tying TonB to transport.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

MatGAT: an application that generates similarity/identity matrices using protein or DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Finding Functional Features in Saccharomyces Genomes by Phylogenetic Footprinting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Linearly concatenated cyclobutane lipids form a dense bacterial membrane

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

ExbB and ExbD do not function independently in TonB-dependent energy transduction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

The HMMTOP transmembrane topology prediction server

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Cell compartmentalisation in planctomycetes: novel types of structural organisation for the bacterial cell

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Versatility of the mitochondrial protein import machinery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

AcrAB and related multidrug efflux pumps of Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Multidrug resistance mechanisms: drug efflux across two membranes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

The structure of a LysM domain from E. coli membrane-bound lytic murein transglycosylase D (MltD)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Nuclear targeting signal recognition: a key control point in nuclear transport?

1 reference

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21 June 2018

S-Layer proteins

1 reference

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21 June 2018

The type 4 prepilin peptidases comprise a novel family of aspartic acid proteases

1 reference

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21 June 2018

Probability-based protein identification by searching sequence databases using mass spectrometry data

1 reference

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21 June 2018

The Pfam protein families database.

1 reference

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21 June 2018

Alignment and structure prediction of divergent protein families: periplasmic and outer membrane proteins of bacterial efflux pumps

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

21 June 2018

Multimodular penicillin-binding proteins: an enigmatic family of orthologs and paralogs

1 reference

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21 June 2018

Control of cell shape and elongation by the rodA gene in Bacillus subtilis

1 reference

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21 June 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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21 June 2018

Bacterial cell division and the Z ring

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21 June 2018

Protein transport across the eukaryotic endoplasmic reticulum and bacterial inner membranes

1 reference

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21 June 2018

Organization of the Escherichia coli K-12 gene cluster responsible for production of the extracellular polysaccharide colanic acid

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21 June 2018

Molecular divergence and phylogeny: rates and patterns of cytochrome b evolution in cranes

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21 June 2018

Structural, functional, and evolutionary relationships among extracellular solute-binding receptors of bacteria

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21 June 2018

Protein import into peroxisomes and biogenesis of the organelle

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21 June 2018

A simple method for displaying the hydropathic character of a protein

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21 June 2018

Basic local alignment search tool

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21 June 2018

Structure of a Fibronectin Type III Domain from Tenascin Phased by MAD Analysis of the Selenomethionyl Protein

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21 June 2018

An intracellular pH gradient in the anammox bacterium Kuenenia stuttgartiensis as evaluated by 31P NMR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2881027

31 October 2018

A computational approach for the identification of small GTPases based on preprocessed amino acid sequences.

1 reference

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31 October 2018

SubCellProt: predicting protein subcellular localization using machine learning approaches

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31 October 2018

RSLpred: an integrative system for predicting subcellular localization of rice proteins combining compositional and evolutionary information

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31 October 2018

Differential translocation of green fluorescent protein fused to signal sequences of Ruminococcus albus cellulases by the Tat and Sec pathways of Escherichia coli

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31 October 2018

Tat-dependent targeting of Rieske iron-sulphur proteins to both the plasma and thylakoid membranes in the cyanobacterium Synechocystis PCC6803.

1 reference

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31 October 2018

Enrichment and characterization of marine anammox bacteria associated with global nitrogen gas production

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31 October 2018

Signal-3L: A 3-layer approach for predicting signal peptides

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31 October 2018

Import of proteins into mitochondria and chloroplasts

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31 October 2018

Signal-CF: a subsite-coupled and window-fusing approach for predicting signal peptides.

1 reference

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31 October 2018

Signal sequence directs localized secretion of bacterial surface proteins.

1 reference

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31 October 2018

Persistent biases in the amino acid composition of prokaryotic proteins.

1 reference

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31 October 2018

Multiple roles of T7 RNA polymerase and T7 lysozyme during bacteriophage T7 infection

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31 October 2018

A cytochrome b562 variant with a c-type cytochrome CXXCH heme-binding motif as a probe of the Escherichia coli cytochrome c maturation system

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31 October 2018

Adaptation of protein secretion to extremely high-salt conditions by extensive use of the twin-arginine translocation pathway

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31 October 2018

Support vector machine approach for protein subcellular localization prediction

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31 October 2018

Molecular mechanisms of cytochrome c biogenesis: three distinct systems

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31 October 2018

Thermostability and aliphatic index of globular proteins.

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31 October 2018

The random character of protein evolution and its effects on the reliability of phylogenetic information deduced from amino acid sequences and compositions

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31 October 2018

Combined structural and chemical analysis of the anammoxosome: A membrane-bounded intracytoplasmic compartment in anammox bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/20459862

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proteins in different Synechocystis compartments have distinguishing N-terminal features: a combined proteomics and multivariate sequence analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/20459862

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Overflow of a hyper-produced secretory protein from the Bacillus Sec pathway into the Tat pathway for protein secretion as revealed by proteogenomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/20459862

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bifunctional TatA subunits in minimal Tat protein translocases

1 reference

https://pubmed.ncbi.nlm.nih.gov/20459862

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of key proteins involved in the anammox reaction

1 reference

https://pubmed.ncbi.nlm.nih.gov/20459862

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mass spectrometry-based quantitative proteomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/20459862

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Serralysin and related bacterial proteinases

1 reference

https://pubmed.ncbi.nlm.nih.gov/20459862

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-11-299

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Dimensions Publication ID

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-11-299

9 September 2019

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

ResearchGate publication ID

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