(Q33687232)

28 July 2017

title

Amino-acid co-variation in HIV-1 Gag subtype C: HLA-mediated selection pressure and compensatory dynamics (English)

1 reference

28 July 2017

12

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28 July 2017

Christian Brander

15

0 references

Bruce D. Walker

14

object named as

Bruce D Walker

1 reference

28 July 2017

11

Hoosen Coovadia

1 reference

28 July 2017

13

Philip J R Goulder

1 reference

28 July 2017

17

James I Mullins

1 reference

28 July 2017

9

Gerald H Learn

1 reference

28 July 2017

16

David E Heckerman

1 reference

28 July 2017

1

Morgane Rolland

1 reference

28 July 2017

8

Dana N Raugi

1 reference

28 July 2017

10

Brandon S Maust

1 reference

28 July 2017

Jonathan M Carlson

2

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28 July 2017

Siriphan Manocheewa

3

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28 July 2017

J Victor Swain

4

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28 July 2017

Erinn Lanxon-Cookson

5

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28 July 2017

Wenjie Deng

6

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28 July 2017

Christine M Rousseau

7

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28 July 2017

language of work or name

English

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publication date

1 September 2010

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28 July 2017

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28 July 2017

volume

5

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28 July 2017

issue

9

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Creative Commons Attribution 4.0 International

28 July 2017

copyright license

start time

1 September 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Structural and functional constraints limit options for cytotoxic T-lymphocyte escape in the immunodominant HLA-B27-restricted epitope in human immunodeficiency virus type 1 capsid

21 June 2018

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21 June 2018

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Escape from the dominant HLA-B27-restricted cytotoxic T-lymphocyte response in Gag is associated with a dramatic reduction in human immunodeficiency virus type 1 replication

21 June 2018

1 reference

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Escape and compensation from early HLA-B57-mediated cytotoxic T-lymphocyte pressure on human immunodeficiency virus type 1 Gag alter capsid interactions with cyclophilin A.

21 June 2018

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Evidence of differential HLA class I-mediated viral evolution in functional and accessory/regulatory genes of HIV-1

21 June 2018

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Leveraging hierarchical population structure in discrete association studies

21 June 2018

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Characterization of mutation spectra with ultra-deep pyrosequencing: application to HIV-1 drug resistance

21 June 2018

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Compensatory mutation partially restores fitness and delays reversion of escape mutation within the immunodominant HLA-B*5703-restricted Gag epitope in chronic human immunodeficiency virus type 1 infection

21 June 2018

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Adaptation to Human Populations Is Revealed by Within-Host Polymorphisms in HIV-1 and Hepatitis C Virus

21 June 2018

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Extensive intrasubtype recombination in South African human immunodeficiency virus type 1 subtype C infections

21 June 2018

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Evolutionary and physiological importance of hub proteins

21 June 2018

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Therapeutic strategies towards HIV-1 infection in macrophages

21 June 2018

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Modeling and estimation of replication fitness of human immunodeficiency virus type 1 in vitro experiments by using a growth competition assay

21 June 2018

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Sexual transmission of single human immunodeficiency virus type 1 virions encoding highly polymorphic multisite cytotoxic T-lymphocyte escape variants

21 June 2018

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Novel human immunodeficiency virus type 1 protease mutations potentially involved in resistance to protease inhibitors

21 June 2018

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Transmission and accumulation of CTL escape variants drive negative associations between HIV polymorphisms and HLA.

21 June 2018

1 reference

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HyPhy: hypothesis testing using phylogenies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2931691

Immune selection for altered antigen processing leads to cytotoxic T lymphocyte escape in chronic HIV-1 infection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2931691

Fitness variations and their impact on the evolution of antiretroviral drug resistance.

21 June 2018

1 reference

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A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 June 2018

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PROTEIN STRUCTURE RELATIONSHIPS REVEALED BY MUTATIONAL ANALYSIS.

21 June 2018

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21 June 2018

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21 June 2018

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Proteolytic refolding of the HIV-1 capsid protein amino-terminus facilitates viral core assembly

21 June 2018

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21 June 2018

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21 June 2018

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Covariation of amino acid positions in HIV-1 protease

21 June 2018

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Large-scale amplification, cloning and sequencing of near full-length HIV-1 subtype C genomes

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0012463

HIV evolution: CTL escape mutation and reversion after transmission

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0012463

Founder Effects in the Assessment of HIV Polymorphisms and HLA Allele Associations

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0012463

CD8+ T-cell responses to different HIV proteins have discordant associations with viral load

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0012463

Immunologic reconstitution after 1 year of highly active antiretroviral therapy, with or without protease inhibitors.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2931691

Statistical Methods for Identifying Differentially Expressed Genes in DNA Microarrays

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20824187

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0012463

1 reference

28 July 2017

0 references

1 reference

28 July 2017

1 reference