(Q33732814)

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A-to-I editing in human miRNAs is enriched in seed sequence, influenced by sequence contexts and significantly hypoedited in glioblastoma multiforme

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scholarly article

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Europe PubMed Central

29 July 2017

A-to-I editing in human miRNAs is enriched in seed sequence, influenced by sequence contexts and significantly hypoedited in glioblastoma multiforme (English)

1 reference

Europe PubMed Central

29 July 2017

1 reference

based on heuristic

inferred from title

3

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12 June 2020

Debasish Mukherjee

8

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12 June 2020

Arijit Mukhopadhyay

12

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12 June 2020

author name string

Deepanjan Paul

1

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12 June 2020

Ashis Narayan Sinha

2

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12 June 2020

Megha Lal

4

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12 June 2020

Subhashree Nayak

5

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12 June 2020

Anchal Sharma

6

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12 June 2020

Bharati Mehani

7

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12 June 2020

Saurabh V Laddha

9

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12 June 2020

Ashish Suri

10

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12 June 2020

Chitra Sarkar

11

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12 June 2020

language of work or name

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publication date

26 May 2017

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29 July 2017

Scientific Reports

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12 June 2020

7

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Europe PubMed Central

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12 June 2020

1

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12 June 2020

2466

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12 June 2020

copyright license

Creative Commons Attribution 4.0 International

26 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

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describes a project that uses

object named as

DESeq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

https://scigraph.springernature.com/pub.10.1038/s41598-017-02397-6

0 references

Detecting N6-methyladenosine sites from RNA transcriptomes using ensemble Support Vector Machines

1 reference

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28 July 2018

iRNA-AI: identifying the adenosine to inosine editing sites in RNA sequences.

1 reference

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28 July 2018

PAI: Predicting adenosine to inosine editing sites by using pseudo nucleotide compositions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Accurate detection for a wide range of mutation and editing sites of microRNAs from small RNA high-throughput sequencing profiles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

A-to-I editing of coding and non-coding RNAs by ADARs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Genomic analysis of ADAR1 binding and its involvement in multiple RNA processing pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Modulation of microRNA editing, expression and processing by ADAR2 deaminase in glioblastoma.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

ADAR2 induces reproducible changes in sequence and abundance of mature microRNAs in the mouse brain.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Conserved microRNA editing in mammalian evolution, development and disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

The dynamic epitranscriptome: N6-methyladenosine and gene expression control

1 reference

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28 July 2018

A biochemical landscape of A-to-I RNA editing in the human brain transcriptome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Mammalian conserved ADAR targets comprise only a small fragment of the human editosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Genome-wide analysis reveals downregulation of miR-379/miR-656 cluster in human cancers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Attenuated adenosine-to-inosine editing of microRNA-376a* promotes invasiveness of glioblastoma cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

A comprehensive analysis of precursor microRNA cleavage by human Dicer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

A-to-I editing of microRNAs in the mammalian brain increases during development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Systematic identification of edited microRNAs in the human brain

1 reference

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28 July 2018

ViennaRNA Package 2.0

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Accurate identification of A-to-I RNA editing in human by transcriptome sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Human mitochondrial diseases caused by lack of taurine modification in mitochondrial tRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Requirement of the RNA-editing enzyme ADAR2 for normal physiology in mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

The RNA Modification Database, RNAMDB: 2011 update

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Molecular diversity through RNA editing: a balancing act.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Functions and regulation of RNA editing by ADAR deaminases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

The Sequence Alignment/Map format and SAMtools

1 reference

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28 July 2018

Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

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28 July 2018

Frequency and fate of microRNA editing in human brain

1 reference

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28 July 2018

A-to-I editing challenger or ally to the microRNA process

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

RNA editing of the microRNA-151 precursor blocks cleavage by the Dicer-TRBP complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Redirection of silencing targets by adenosine-to-inosine editing of miRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Modulation of microRNA processing and expression through RNA editing by ADAR deaminases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

The functions of animal microRNAs

1 reference

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28 July 2018

WebLogo: A Sequence Logo Generator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

Prediction of mammalian microRNA targets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

ADAR2 A-->I editing: site selectivity and editing efficiency are separate events

1 reference

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28 July 2018

C-to-U RNA editing: mechanisms leading to genetic diversity

1 reference

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28 July 2018

RNA editing by adenosine deaminases that act on RNA

1 reference

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28 July 2018

Substrate recognition by ADAR1 and ADAR2

1 reference

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28 July 2018

Inosine exists in mRNA at tissue-specific levels and is most abundant in brain mRNA

1 reference

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28 July 2018

Apolipoprotein B mRNA-editing protein induces hepatocellular carcinoma and dysplasia in transgenic animals

1 reference

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28 July 2018

Preferential selection of adenosines for modification by double-stranded RNA adenosine deaminase.

1 reference

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28 July 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

A novel form of tissue-specific RNA processing produces apolipoprotein-B48 in intestine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

28 July 2018

The many roles of an RNA editor.

1 reference

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21 January 2018

MicroRNAs: genomics, biogenesis, mechanism, and function

2 references

https://api.crossref.org/works/10.1038%2FS41598-017-02397-6

21 January 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5446428

30 October 2018

Altered expression and editing of miRNA-100 regulates iTreg differentiation.

1 reference

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21 January 2018

Editing independent effects of ADARs on the miRNA/siRNA pathways

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-02397-6

21 January 2018

RNA editome in rhesus macaque shaped by purifying selection

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-02397-6

21 January 2018

Mef2-mediated transcription of the miR379-410 cluster regulates activity-dependent dendritogenesis by fine-tuning Pumilio2 protein levels

1 reference

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21 January 2018

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

1 reference

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21 January 2018

The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data

1 reference

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21 January 2018

Double-stranded RNA adenosine deaminases ADAR1 and ADAR2 have overlapping specificities

1 reference

https://pubmed.ncbi.nlm.nih.gov/28550310

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1038/S41598-017-02397-6

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28550310%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Dimensions Publication ID

0 references

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28550310%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28550310%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

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