(Q33733904)

29 July 2017

title

Capillarity theory for the fly-casting mechanism (English)

1 reference

29 July 2017

3

Peter G Wolynes

1 reference

29 July 2017

Emmanuel Trizac

1

1 reference

29 July 2017

Yaakov Levy

series ordinal

2

1 reference

29 July 2017

publication date

28 January 2010

1 reference

Proceedings of the National Academy of Sciences of the United States of America

29 July 2017

published in

1 reference

29 July 2017

volume

107

1 reference

29 July 2017

issue

7

1 reference

29 July 2017

page(s)

2746-2750

1 reference

Direct observation of ultrafast folding and denatured state dynamics in single protein molecules

29 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Linking folding and binding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Dynamics of one-state downhill protein folding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Transition state for protein-DNA recognition

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Origins of barriers and barrierless folding in BBL.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Conformational transitions of adenylate kinase: switching by cracking

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Distinguishing between cooperative and unimodal downhill protein folding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Effects of denaturants on the dynamics of loop formation in polypeptides

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Mechanisms of protein assembly: lessons from minimalist models

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Equilibrium and kinetic folding pathways of a TIM barrel with a funneled energy landscape

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Intrinsically unstructured proteins and their functions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Three-body interactions improve the prediction of rate and mechanism in protein folding models

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Folding lambda-repressor at its speed limit

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

The protein folding 'speed limit'.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Theory of protein folding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Protein topology determines binding mechanism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Nonlinear elasticity, proteinquakes, and the energy landscapes of functional transitions in proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Intrinsically unstructured proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Ultrafast folding of WW domains without structured aromatic clusters in the denatured state

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Intrinsically disordered protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Speeding molecular recognition by using the folding funnel: the fly-casting mechanism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Theory of protein folding: the energy landscape perspective

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Folding funnels and energy landscapes of larger proteins within the capillarity approximation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840330

Fly-casting in protein-DNA binding: frustration between protein folding and electrostatics facilitates target recognition

21 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0914727107

Simple energy landscape model for the kinetics of functional transitions in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0914727107

Kinetic advantage of intrinsically disordered proteins in coupled folding-binding process: a critical assessment of the "fly-casting" mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0914727107

Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0914727107

Quantifying the roughness on the free energy landscape: entropic bottlenecks and protein folding rates

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0914727107

A survey of flexible protein binding mechanisms and their transition states using native topology based energy landscapes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0914727107

The folding and dimerization of HIV-1 protease: evidence for a stable monomer from simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0914727107

THE weighted histogram analysis method for free-energy calculations on biomolecules. I. The method

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0914727107

Disordered tails of homeodomains facilitate DNA recognition by providing a trade-off between folding and specific binding

21 January 2018

1 reference

12 December 2020

Searching DNA via a "Monkey Bar" mechanism: the significance of disordered tails

1 reference

12 December 2020

Interplay among tertiary contacts, secondary structure formation and side-chain packing in the protein folding mechanism: all-atom representation study of protein L

1 reference

12 December 2020

Rate of protein folding near the point of thermodynamic equilibrium between the coil and the most stable chain fold

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0914727107

1 reference

29 July 2017

0 references

1 reference

1 reference

29 July 2017

1 reference