(Q33755615)

English

iHyd-PseAAC: predicting hydroxyproline and hydroxylysine in proteins by incorporating dipeptide position-specific propensity into pseudo amino acid composition

scientific article

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

iHyd-PseAAC: predicting hydroxyproline and hydroxylysine in proteins by incorporating dipeptide position-specific propensity into pseudo amino acid composition (English)

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

5

object named as

Kuo-Chen Chou

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

author name string

Yan Xu

1

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Xin Wen

2

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Xiao-Jian Shao

3

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Nai-Yang Deng

4

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

language of work or name

0 references

publication date

5 May 2014

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

International Journal of Molecular Sciences

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

15

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

5

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

7594-7610

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

copyright license

Creative Commons Attribution 4.0 International

5 May 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

iNR-Drug: predicting the interaction of drugs with nuclear receptors in cellular networking

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

iRSpot-TNCPseAAC: identify recombination spots with trinucleotide composition and pseudo amino acid components

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

iEzy-drug: a web server for identifying the interaction between enzymes and drugs in cellular networking

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

iSNO-AAPair: incorporating amino acid pairwise coupling into PseAAC for predicting cysteine S-nitrosylation sites in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Predicting anticancer peptides with Chou's pseudo amino acid composition and investigating their mutagenicity via Ames test

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

iHSP-PseRAAAC: Identifying the heat shock protein families using pseudo reduced amino acid alphabet composition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Some remarks on predicting multi-label attributes in molecular biosystems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

propy: a tool to generate various modes of Chou's PseAAC.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

iSNO-PseAAC: predict cysteine S-nitrosylation sites in proteins by incorporating position specific amino acid propensity into pseudo amino acid composition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

iRSpot-PseDNC: identify recombination spots with pseudo dinucleotide composition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

DbPTM 3.0: an informative resource for investigating substrate site specificity and functional association of protein post-translational modifications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

iNuc-PhysChem: a sequence-based predictor for identifying nucleosomes via physicochemical properties

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Predicting membrane protein types by incorporating protein topology, domains, signal peptides, and physicochemical properties into the general form of Chou's pseudo amino acid composition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Identifying protein quaternary structural attributes by incorporating physicochemical properties into the general form of Chou's PseAAC via discrete wavelet transform.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Prediction of allergenic proteins by means of the concept of Chou's pseudo amino acid composition and a machine learning approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

PseAAC-Builder: a cross-platform stand-alone program for generating various special Chou's pseudo-amino acid compositions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Predicting protein submitochondria locations by combining different descriptors into the general form of Chou's pseudo amino acid composition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Prediction and analysis of protein hydroxyproline and hydroxylysine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Some remarks on protein attribute prediction and pseudo amino acid composition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Prediction of G-protein-coupled receptor classes based on the concept of Chou's pseudo amino acid composition: an approach from discrete wavelet transform.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Using the augmented Chou's pseudo amino acid composition for predicting protein submitochondria locations based on auto covariance approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Prediction of subcellular localization of apoptosis protein using Chou's pseudo amino acid composition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Proteomics-based identification of novel factor inhibiting hypoxia-inducible factor (FIH) substrates indicates widespread asparaginyl hydroxylation of ankyrin repeat domain-containing proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Anti-metastatic effect of Biophytum sensitivum is exerted through its cytokine and immunomodulatory activity and its regulatory effect on the activation and nuclear translocation of transcription factors in B16F-10 melanoma cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

The importance of proline residues in the structure, stability and susceptibility to proteolytic degradation of collagens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Lysine hydroxylation and cross-linking of collagen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Recent progress in protein subcellular location prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Using Chou's amphiphilic pseudo-amino acid composition and support vector machine for prediction of enzyme subfamily classes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

A preliminary study on antimetastatic activity of Thuja occidentalis L. in mice model

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Using amphiphilic pseudo amino acid composition to predict enzyme subfamily classes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Prediction of protein signal sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Prediction of protein cellular attributes using pseudo-amino acid composition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Prediction of human immunodeficiency virus protease cleavage sites in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Predicting human immunodeficiency virus protease cleavage sites in proteins by a discriminant function method

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

A vectorized sequence-coupling model for predicting HIV protease cleavage sites in proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

A sequence-coupled vector-projection model for predicting the specificity of GalNAc-transferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Prediction of Protein Structural Classes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Conformational implications of enzymatic proline hydroxylation in collagen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4057693

21 June 2018

How stable is a collagen triple helix? An ab initio study on various collagen and beta-sheet forming sequences

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Deregulation of collagen metabolism in human stomach cancer.

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Adiponectin multimerization is dependent on conserved lysines in the collagenous domain: evidence for regulation of multimerization by alterations in posttranslational modifications.

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Predict collagen hydroxyproline sites using support vector machines

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

iNuc-PseKNC: a sequence-based predictor for predicting nucleosome positioning in genomes with pseudo k-tuple nucleotide composition

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Combining evolutionary information extracted from frequency profiles with sequence-based kernels for protein remote homology detection.

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Prediction of protein signal sequences and their cleavage sites.

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Using subsite coupling to predict signal peptides

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Prediction of signal peptides using scaled window

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

iAMP-2L: a two-level multi-label classifier for identifying antimicrobial peptides and their functional types.

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Protein Remote Homology Detection by Combining Chou's Pseudo Amino Acid Composition and Profile-Based Protein Representation

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Euk-mPLoc: a fusion classifier for large-scale eukaryotic protein subcellular location prediction by incorporating multiple sites

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

iLoc-Hum: using the accumulation-label scale to predict subcellular locations of human proteins with both single and multiple sites.

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Hum-mPLoc: an ensemble classifier for large-scale human protein subcellular location prediction by incorporating samples with multiple sites.

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Discriminating bioluminescent proteins by incorporating average chemical shift and evolutionary information into the general form of Chou's pseudo amino acid composition.

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Predicting protein subchloroplast locations with both single and multiple sites via three different modes of Chou's pseudo amino acid compositions

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

The modified Mahalanobis Discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition.

1 reference

https://api.crossref.org/works/10.3390%2FIJMS15057594

21 January 2018

Identifiers

10.3390/IJMS15057594

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q33755615&oldid=1861911194"