(Q33768410)

29 July 2017

title

Lateral acquisition of genes is affected by the friendliness of their products (English)

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29 July 2017

2

Yanay Ofran

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Uri Gophna

series ordinal

1

object named as

Uri Gophna

1 reference

29 July 2017

Yanay Ofran

2

1 reference

29 July 2017

language of work or name

English

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publication date

13 December 2010

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Proceedings of the National Academy of Sciences of the United States of America

29 July 2017

published in

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29 July 2017

volume

108

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29 July 2017

issue

1

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29 July 2017

page(s)

343-348

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Protein interface conservation across structure space

29 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Biased gene transfer mimics patterns created through shared ancestry

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Lateral transfer of genes and gene fragments in prokaryotes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

A complex-centric view of protein network evolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Are protein domains modules of lateral genetic transfer?

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

How proteins get in touch: interface prediction in the study of biomolecular complexes.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Recent developments in the MAFFT multiple sequence alignment program

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

The impact of horizontal gene transfer in shaping operons and protein interaction networks--direct evidence of preferential attachment

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Interaction-site prediction for protein complexes: a critical assessment

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

ISIS: interaction sites identified from sequence.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Relating three-dimensional structures to protein networks provides evolutionary insights

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Protein-protein interactions more conserved within species than across species

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Large-scale identification of protein-protein interaction of Escherichia coli K-12

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Bacterial type III secretion systems are ancient and evolved by multiple horizontal-transfer events

28 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

28 July 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

How big is the iceberg of which organellar genes in nuclear genomes are but the tip?

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Inferring genome trees by using a filter to eliminate phylogenetically discordant sequences and a distance matrix based on mean normalized BLASTP scores

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

On surrogate methods for detecting lateral gene transfer

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Ecological fitness, genomic islands and bacterial pathogenicity. A Darwinian view of the evolution of microbes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Horizontal gene transfer among genomes: the complexity hypothesis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Molecular archaeology of the Escherichia coli genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

The HSSP database of protein structure-sequence alignments and family profiles

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Selfish operons: horizontal transfer may drive the evolution of gene clusters

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Evolution in bacteria: evidence for a universal substitution rate in cellular genomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

Erosion of interaction networks in reduced and degraded genomes.

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009775108

Complexity, connectivity, and duplicability as barriers to lateral gene transfer

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009775108

Protein-protein interaction hotspots carved into sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009775108

Predicted protein-protein interaction sites from local sequence information.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009775108

Integration of horizontally transferred genes into regulatory interaction networks takes many million years

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009775108

Aminoacyl-tRNA synthetases, the genetic code, and the evolutionary process

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009775108

Metagrowth: a new resource for the building of metabolic hypotheses in microbiology

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009775108

Nonparametric estimates of standard error: The jackknife, the bootstrap and other methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1009775108

The PredictProtein server

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3017175

30 October 2018

Identifiers

DOI

10.1073/PNAS.1009775108

1 reference

29 July 2017

0 references

1 reference

29 July 2017

1 reference