(Q33781752)

29 July 2017

title

Testing protein-folding simulations by experiment: B domain of protein A. (English)

1 reference

29 July 2017

0 references

4

Alan R Fersht

1 reference

29 July 2017

3

Valerie Daggett

1 reference

29 July 2017

Satoshi Sato

1

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29 July 2017

Tomasz L Religa

series ordinal

2

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29 July 2017

language of work or name

English

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publication date

6 April 2004

1 reference

Proceedings of the National Academy of Sciences of the United States of America

29 July 2017

published in

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29 July 2017

volume

101

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29 July 2017

issue

18

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29 July 2017

page(s)

6952-6956

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Microsecond folding dynamics of the F13W G29A mutant of the B domain of staphylococcal protein A by laser-induced temperature jump

29 July 2017

cites work

1 reference

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Folding a protein in a computer: An atomic description of the folding/unfolding of protein A

4 July 2018

1 reference

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Unifying features in protein-folding mechanisms

4 July 2018

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The present view of the mechanism of protein folding

4 July 2018

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The complete folding pathway of a protein from nanoseconds to microseconds

4 July 2018

1 reference

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An atomically detailed study of the folding pathways of protein A with the stochastic difference equation

4 July 2018

1 reference

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A structure-based method for derivation of all-atom potentials for protein folding

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406447

Protein folding and unfolding at atomic resolution

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406447

Solution structure of an immunoactive peptide fragment of Staphylococcal protein-A.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406447

Staphylococcal protein A: unfolding pathways, unfolded states, and differences between the B and E domains

4 July 2018

1 reference

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Protein backbone angle restraints from searching a database for chemical shift and sequence homology

4 July 2018

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

4 July 2018

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Exploring the folding free energy surface of a three-helix bundle protein

4 July 2018

1 reference

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Structural comparison in solution of a native and retro peptide derived from the third helix of Staphylococcus aureus protein A, domain B: retro peptides, a useful tool for the discrimination of helix stabilization factors dependent on the peptide c

4 July 2018

1 reference

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Absence of a stable intermediate on the folding pathway of protein A.

4 July 2018

1 reference

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Nucleation mechanisms in protein folding

4 July 2018

1 reference

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Specific intermediates in the folding reactions of small proteins and the mechanism of protein folding

4 July 2018

1 reference

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Structure-activity relationships in engineered proteins: analysis of use of binding energy by linear free energy relationships

4 July 2018

1 reference

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Mapping the transition state and pathway of protein folding by protein engineering

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406447

Fluorescence spectrum of barnase: contributions of three tryptophan residues and a histidine-related pH dependence

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406447

Folding of chymotrypsin inhibitor 2. 1. Evidence for a two-state transition

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406447

Three-dimensional solution structure of the B domain of staphylococcal protein A: comparisons of the solution and crystal structures

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406447

Preorganized secondary structure as an important determinant of fast protein folding

4 July 2018

1 reference

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Effect of alanine versus glycine in alpha-helices on protein stability

21 January 2018

1 reference

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Application of the diffusion-collision model to the folding of three-helix bundle proteins.

21 January 2018

1 reference

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MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0401396101

Folding of a small helical protein using hydrogen bonds and hydrophobicity forces

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0401396101

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0401396101

The role of sidechain packing and native contact interactions in folding: Discontinuous molecular dynamics folding simulations of an all-atom Gō model of fragment B of Staphylococcal protein A

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0401396101

Interpreting the folding kinetics of helical proteins

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406447

30 October 2018

Protein-folding dynamics

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0401396101

Ab initio folding of helix bundle proteins using molecular dynamics simulations

21 January 2018

1 reference

12 December 2020

Alpha-helix stability in proteins. I. Empirical correlations concerning substitution of side-chains at the N and C-caps and the replacement of alanine by glycine or serine at solvent-exposed surfaces

1 reference

12 December 2020

Exploring the energy surface of protein folding by structure-reactivity relationships and engineered proteins: observation of Hammond behavior for the gross structure of the transition state and anti-Hammond behavior for structural elements for unfo

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12 December 2020

Characterization of the folding kinetics of a three-helix bundle protein via a minimalist Langevin model

1 reference

12 December 2020

First-principles calculation of the folding free energy of a three-helix bundle protein

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0401396101

1 reference

29 July 2017

0 references

1 reference

29 July 2017

1 reference