(Q33804512)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

title

Comparative analysis and supragenome modeling of twelve Moraxella catarrhalis clinical isolates (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

main subject

Moraxella catarrhalis

object named as

Moraxella catarrhalis

1 reference

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

John P Hays

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

author name string

Jeremiah J Davie

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Josh Earl

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Stefan P W de Vries

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Azad Ahmed

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Fen Z Hu

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Hester J Bootsma

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Kim Stol

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Peter W M Hermans

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Robert M Wadowsky

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Anthony A Campagnari

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

language of work or name

English

0 references

publication date

26 January 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

volume

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

page(s)

70

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

Indirect pathogenicity of Haemophilus influenzae and Moraxella catarrhalis in polymicrobial otitis media occurs via interspecies quorum signaling.

20 January 2020

cites work

1 reference

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Bacterial DNA uptake sequences can accumulate by molecular drive alone

4 July 2018

1 reference

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The distributed genome hypothesis as a rubric for understanding evolution in situ during chronic bacterial biofilm infectious processes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

A catalog of reference genomes from the human microbiome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Genome analysis of Moraxella catarrhalis strain BBH18, [corrected] a human respiratory tract pathogen

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

The CRISPR system: small RNA-guided defense in bacteria and archaea

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Current management of pediatric acute otitis media

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

CRISPR/Cas, the immune system of bacteria and archaea

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Pan-genome analysis provides much higher strain typing resolution than multi-locus sequence typing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Biological diversity of prokaryotic type IV secretion systems.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Identification of a bacteriocin and its cognate immunity factor expressed by Moraxella catarrhalis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Molecular aspects of Moraxella catarrhalis pathogenesis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Moraxella catarrhalis, a human respiratory tract pathogen

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Virulence mechanisms of Moraxella in the pathogenesis of infection

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Infection in the pathogenesis and course of chronic obstructive pulmonary disease

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Fluorescence "in situ" hybridization for the detection of biofilm in the middle ear and upper respiratory tract mucosa

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Association of IS1016 with the hia adhesin gene and biotypes V and I in invasive nontypeable Haemophilus influenzae

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Computational and experimental analysis of redundancy in the central metabolism of Geobacter sulfurreducens

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

The rise and spread of a new pathogen: seroresistant Moraxella catarrhalis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

The role of biofilms in otolaryngologic infections: update 2007.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Global burden of COPD: risk factors, prevalence, and future trends

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Metabolic analysis of Moraxella catarrhalis and the effect of selected in vitro growth conditions on global gene expression

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Characterization and modeling of the Haemophilus influenzae core and supragenomes based on the complete genomic sequences of Rd and 12 clinical nontypeable strains

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

KAAS: an automatic genome annotation and pathway reconstruction server

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Evolutionary conservation of sequence and secondary structures in CRISPR repeats

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Identification of a novel two-partner secretion locus in Moraxella catarrhalis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Moraxella catarrhalis strain O35E expresses two filamentous hemagglutinin-like proteins that mediate adherence to human epithelial cells

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Direct detection of bacterial biofilms on the middle-ear mucosa of children with chronic otitis media

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Estimating the "effective number of codons": the Wright way of determining codon homozygosity leads to superior estimates

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Transposition of ISHp608, member of an unusual family of bacterial insertion sequences

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Expression of type IV pili by Moraxella catarrhalis is essential for natural competence and is affected by iron limitation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

IS200: an old and still bacterial transposon.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Complement-resistant Moraxella catarrhalis forms a genetically distinct lineage within the species

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

The UspA1 protein and a second type of UspA2 protein mediate adherence of Moraxella catarrhalis to human epithelial cells in vitro

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Improved microbial gene identification with GLIMMER

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Codon usage and lateral gene transfer in Bacillus subtilis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Structural analysis of plasmid pLQ510 from Moraxella catarrhalis E22.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Interaction of Streptococcus pneumoniae and Moraxella catarrhalis: investigation of the indirect pathogenic role of beta-lactamase-producing moraxellae by use of a continuous-culture biofilm system

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

GCUA: general codon usage analysis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

A protective epitope of Moraxella catarrhalis is encoded by two different genes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Cloning and characterization of Helicobacter pylori succinyl CoA:acetoacetate CoA-transferase, a novel prokaryotic member of the CoA-transferase family

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

4 July 2018

Codon selection in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Codon usage and tRNA content in unicellular and multicellular organisms

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Improved tools for biological sequence comparison

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Branhamella catarrhalis: an organism gaining respect as a pathogen

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

The 'effective number of codons' used in a gene

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

The Haemophilus influenzae capsulation gene cluster: a compound transposon

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Pulmonary clearance of Moraxella catarrhalis in an animal model

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Contribution of Moraxella catarrhalis type IV pili to nasopharyngeal colonization and biofilm formation

4 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-70

Analysis of Moraxella catarrhalis by DNA typing: evidence for a distinct subpopulation associated with virulence traits

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-70

A novel plasmid (pEMCJH03) isolated from moraxella catarrhalis possibly useful as a cloning and expression vector within this species

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-70

Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-70

The repetitive DNA elements called CRISPRs and their associated genes: evidence of horizontal transfer among prokaryotes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-70

An eleven-base-pair sequence determines the specificity of DNA uptake in Haemophilus transformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-70

Haemophilus influenzae survival during complement-mediated attacks is promoted by Moraxella catarrhalis outer membrane vesicles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-70

Improving acute otitis media outcomes through proper antibiotic use and adherence.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045334

Genotypic and phenotypic relatedness of 80 strains of Branhamella catarrhalis of worldwide origin

30 October 2018

1 reference

12 December 2020

Experimental evidence for Moraxella-induced penicillin neutralization in pneumococcal pneumonia

1 reference

12 December 2020

Antibiotic stress induces genetic transformability in the human pathogen Streptococcus pneumoniae

1 reference

12 December 2020

Vaccine development for Moraxella catarrhalis: rationale, approaches and challenges

1 reference

12 December 2020

Acute otitis media caused by Moraxella catarrhalis: epidemiologic and clinical characteristics

1 reference

12 December 2020

Branhamella catarrhalis as an indirect pathogen

1 reference

12 December 2020

Direct and indirect pathogenicity of Branhamella catarrhalis

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-12-70

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

20 January 2020

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-70

release_oaei63pmuvgzhc7njsbmzk4exm

9 September 2019

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/oaei63pmuvgzhc7njsbmzk4exm

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21269504%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

PubMed publication ID

21269504

1 reference