(Q33871774)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

title

Cotranscriptional folding of a riboswitch at nucleotide resolution (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Eric J Strobel

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Angela M Yu

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Aimin Yu

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Julius B Lucks

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

author name string

John T Lis

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

publication date

31 October 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

Nature Structural & Molecular Biology

26 March 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

volume

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

issue

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

page(s)

1124-1131

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

26 March 2020

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5497173/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Characterizing RNA structures in vitro and in vivo with selective 2'-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

RNA motif discovery by SHAPE and mutational profiling (SHAPE-MaP).

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Folding and ligand recognition of the TPP riboswitch aptamer at single-molecule resolution.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

28 July 2018

A decade of riboswitches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Direct observation of cotranscriptional folding in an adenine riboswitch

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Transcriptional pausing coordinates folding of the aptamer domain and the expression platform of a riboswitch

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Widespread genetic switches and toxicity resistance proteins for fluoride

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Correlating SHAPE signatures with three-dimensional RNA structures

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Riboswitches: Structures and Mechanisms

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Folding of a transcriptionally acting preQ1 riboswitch

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

The ligand-free state of the TPP riboswitch: a partially folded RNA structure

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Time-resolved RNA SHAPE chemistry: quantitative RNA structure analysis in one-second snapshots and at single-nucleotide resolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

RNA polymerase elongation factors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Folding of noncoding RNAs during transcription facilitated by pausing-induced nonnative structures

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Ligand-induced folding of the guanine-sensing riboswitch is controlled by a combined predetermined induced fit mechanism

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

DMS footprinting of structured RNAs and RNA-protein complexes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

RNA folding during transcription

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Adenine riboswitches and gene activation by disruption of a transcription terminator

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Exploring the folding landscape of a structured RNA

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Functional topography of nascent RNA in elongation intermediates of RNA polymerase

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Quantitative analysis of transcriptional pausing by Escherichia coli RNA polymerase: his leader pause site as paradigm

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Secondary structure formation during RNA synthesis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Probing the structure of RNAs in solution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Elongation by Escherichia coli RNA polymerase is blocked in vitro by a site-specific DNA binding protein

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5497173

Effect of transcription on folding of the Tetrahymena ribozyme

28 July 2018

1 reference

Folding of a large ribozyme during transcription and the effect of the elongation factor NusA.

21 January 2018

1 reference

RNA dynamics: it is about time.

21 January 2018

1 reference

Kinetics of riboswitch regulation studied by in vitro transcription.

21 January 2018

1 reference

RNA Folding During Transcription: Protocols and Studies

21 January 2018

1 reference

Crystal structure of the ribonucleoprotein core of the signal recognition particle

21 January 2018

1 reference

Hierarchy of RNA functional dynamics

21 January 2018

1 reference

The Speed of RNA Transcription and Metabolite Binding Kinetics Operate an FMN Riboswitch

21 January 2018

1 reference

The negative charge of Glu-111 is required to activate the cleavage center of EcoRI endonuclease

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27798597

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NSMB.3316

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27798597%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

PubMed publication ID

27798597

1 reference